Strain Fitness in Pseudomonas simiae WCS417 around PS417_12180

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,644,591	+		PS417_12175	0.20	+0.4
2,644,648	+		PS417_12175	0.25	-1.0
2,644,658	+		PS417_12175	0.26	-1.7
2,644,659	-		PS417_12175	0.26	+1.5
2,645,040	-		PS417_12175	0.62	-0.3
2,645,154	-		PS417_12175	0.73	+0.7
2,645,605	+				-0.4
2,645,605	+				+0.9
2,645,605	+				+0.7
2,645,606	-				-0.0
2,645,623	+				+0.1
2,645,624	-				-0.4
2,645,624	-				+2.1
2,645,624	-				+0.9
2,645,741	-		PS417_12180	0.16	+0.7
2,645,741	-		PS417_12180	0.16	+0.2
2,645,782	+		PS417_12180	0.18	-2.3
2,645,782	+		PS417_12180	0.18	-0.6
2,645,782	+		PS417_12180	0.18	+1.5
2,645,789	-		PS417_12180	0.19	+1.5
2,645,869	+		PS417_12180	0.23	-1.9
2,645,869	+		PS417_12180	0.23	+0.6
2,645,870	-		PS417_12180	0.23	+1.8
2,645,870	-		PS417_12180	0.23	+0.9
2,645,932	+		PS417_12180	0.26	-0.2
2,646,239	-		PS417_12180	0.43	+0.4
2,646,239	-		PS417_12180	0.43	+1.7
2,646,239	-		PS417_12180	0.43	+0.9
2,646,242	+		PS417_12180	0.43	+1.3
2,646,243	-		PS417_12180	0.43	+0.3
2,646,243	-		PS417_12180	0.43	+0.3
2,646,243	-		PS417_12180	0.43	+3.0
2,646,346	+		PS417_12180	0.49	+0.7
2,646,469	+		PS417_12180	0.55	-0.6
2,646,486	+		PS417_12180	0.56	+1.7
2,646,486	+		PS417_12180	0.56	-0.3
2,646,637	+		PS417_12180	0.64	-0.2
2,646,871	+		PS417_12180	0.77	+0.5
2,646,876	+		PS417_12180	0.77	-0.4
2,646,876	+		PS417_12180	0.77	+0.4
2,646,877	-		PS417_12180	0.77	+0.1
2,646,997	+		PS417_12180	0.84	+1.7
2,647,160	-				+0.4
2,647,216	+				+0.7
2,647,217	-				+0.4
2,647,327	+				+0.9
2,647,798	+				-0.6
2,647,799	-				+0.2
2,647,799	-				-0.7
2,647,802	+				-1.0
2,647,803	-				-0.6
2,647,803	-				-0.2
2,647,999	-		PS417_12190	0.10	+1.2
2,648,218	+		PS417_12190	0.24	-0.2
2,648,219	-		PS417_12190	0.24	-1.7