Strain Fitness in Pseudomonas simiae WCS417 around PS417_10785

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,303,886	+				-0.2
2,303,887	-				+0.2
2,303,887	-				-0.4
2,303,887	-				-0.7
2,303,887	-				+0.6
2,303,907	-				-0.5
2,303,907	-				+0.7
2,303,950	+		PS417_10775	0.14	-0.3
2,303,974	-		PS417_10775	0.19	-2.3
2,304,003	-		PS417_10775	0.24	-2.2
2,304,063	+		PS417_10775	0.35	-0.2
2,304,063	+		PS417_10775	0.35	-2.7
2,304,133	+		PS417_10775	0.48	+1.9
2,304,134	-		PS417_10775	0.48	-0.0
2,304,134	-		PS417_10775	0.48	+0.3
2,304,177	-		PS417_10775	0.56	-0.5
2,304,196	-		PS417_10775	0.59	+0.3
2,304,203	+		PS417_10775	0.60	+1.2
2,304,229	+		PS417_10775	0.65	-0.1
2,304,230	-		PS417_10775	0.65	+1.3
2,304,239	+		PS417_10775	0.67	-1.0
2,304,239	+		PS417_10775	0.67	+0.2
2,304,253	+				-0.6
2,304,254	-				-0.8
2,304,404	+				+0.3
2,304,405	-				-0.4
2,304,444	+				+0.7
2,304,463	-				-0.6
2,304,504	+				-0.2
2,304,504	+				-2.1
2,304,507	+				+3.0
2,304,508	-				+0.3
2,304,527	+				-0.9
2,304,573	-				+0.9
2,304,580	+				+0.2
2,304,581	-				-0.6
2,304,606	+				+0.3
2,304,774	+				+4.4
2,304,774	+				+0.6
2,304,775	-				+1.7
2,304,775	-				-0.5
2,304,843	-				-0.0
2,304,894	+				-0.7
2,305,013	+		PS417_10785	0.14	+0.1
2,305,031	-		PS417_10785	0.16	+1.4
2,305,065	+		PS417_10785	0.20	+1.3
2,305,066	-		PS417_10785	0.20	+0.3
2,305,080	+				-0.3
2,305,080	+				-0.7
2,305,081	-		PS417_10785	0.21	-0.6
2,305,291	+		PS417_10785	0.44	+0.8
2,305,293	+		PS417_10785	0.44	-1.0
2,305,302	+		PS417_10785	0.45	-0.2
2,305,306	+		PS417_10785	0.45	-0.3
2,305,306	+		PS417_10785	0.45	+2.4
2,305,306	+		PS417_10785	0.45	+1.2
2,305,344	+		PS417_10785	0.49	+0.5
2,305,345	-		PS417_10785	0.49	-0.3
2,305,345	-		PS417_10785	0.49	-1.2
2,305,345	-		PS417_10785	0.49	+0.2
2,305,365	+		PS417_10785	0.51	+0.4
2,305,365	+		PS417_10785	0.51	-2.5
2,305,377	+		PS417_10785	0.53	-0.1
2,305,378	-		PS417_10785	0.53	+0.3
2,305,409	-		PS417_10785	0.56	+0.2
2,305,473	-		PS417_10785	0.63	+1.6
2,305,487	+		PS417_10785	0.64	-0.9
2,305,555	+		PS417_10785	0.71	-0.7
2,305,565	+				+1.7
2,305,589	-		PS417_10785	0.75	+0.7
2,305,594	-		PS417_10785	0.76	+0.4
2,305,623	+		PS417_10785	0.79	+0.9
2,305,623	+		PS417_10785	0.79	+1.0
2,305,627	+		PS417_10785	0.79	+0.0
2,305,628	-		PS417_10785	0.79	+0.0
2,305,628	-		PS417_10785	0.79	+0.3
2,305,631	+		PS417_10785	0.79	+0.1
2,305,631	+		PS417_10785	0.79	-1.1
2,305,631	+				+0.0
2,305,632	-		PS417_10785	0.80	+0.0
2,305,632	-		PS417_10785	0.80	-0.5
2,305,632	-				+0.7
2,305,649	-		PS417_10785	0.81	+1.4
2,305,680	+		PS417_10785	0.85	-0.1
2,305,681	-		PS417_10785	0.85	-0.3
2,305,681	-		PS417_10785	0.85	-1.8
2,305,685	-		PS417_10785	0.85	+1.7
2,305,772	-				-2.0
2,305,785	+				-0.2
2,305,869	+				-0.0
2,306,005	-				+0.3
2,306,032	-				+0.1
2,306,032	-				-1.4
2,306,039	+				-0.3
2,306,039	+				+0.4
2,306,039	+				-2.8
2,306,040	-				+1.7
2,306,073	-				-0.2
2,306,079	+				-1.6
2,306,080	-				-1.8
2,306,717	+				-0.0
2,306,718	-				-0.6