Strain Fitness in Pseudomonas simiae WCS417 around PS417_09495

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,055,530	+				-1.3
2,055,530	+				+1.7
2,055,531	-		PS417_09490	0.27	-0.5
2,055,531	-		PS417_09490	0.27	-0.4
2,055,531	-		PS417_09490	0.27	-0.8
2,055,531	-		PS417_09490	0.27	+0.6
2,055,776	+		PS417_09490	0.51	+0.5
2,055,791	+		PS417_09490	0.53	-0.8
2,055,791	+		PS417_09490	0.53	+0.5
2,055,792	-		PS417_09490	0.53	-0.7
2,055,792	-		PS417_09490	0.53	+0.2
2,055,921	-		PS417_09490	0.66	-3.3
2,055,921	-		PS417_09490	0.66	-0.8
2,055,974	+		PS417_09490	0.71	-0.1
2,055,974	+		PS417_09490	0.71	-0.1
2,055,974	+		PS417_09490	0.71	+0.4
2,055,974	+		PS417_09490	0.71	-0.3
2,055,975	-		PS417_09490	0.72	-0.7
2,055,987	+		PS417_09490	0.73	+1.3
2,056,049	+		PS417_09490	0.79	-1.1
2,056,063	+		PS417_09490	0.80	+0.2
2,056,063	+		PS417_09490	0.80	-1.2
2,056,205	+				-0.5
2,056,313	-		PS417_09495	0.10	+0.0
2,056,384	+		PS417_09495	0.22	+0.9
2,056,384	+		PS417_09495	0.22	-1.4
2,056,573	+				+0.7
2,056,574	-				+1.2
2,056,574	-		PS417_09495	0.54	-1.4
2,056,622	+		PS417_09495	0.63	-0.1
2,056,622	+		PS417_09495	0.63	-1.0
2,056,659	-		PS417_09495	0.69	+0.2
2,056,736	+		PS417_09495	0.82	-1.4
2,056,736	+		PS417_09495	0.82	-0.2
2,056,836	+				+0.9
2,056,837	-				+0.0
2,056,860	+				+3.1
2,056,860	+				-0.7
2,056,949	-				+1.9
2,056,954	+		PS417_09500	0.10	-0.1
2,056,954	+		PS417_09500	0.10	+0.7
2,056,955	-		PS417_09500	0.11	+0.2
2,056,955	-		PS417_09500	0.11	-0.2
2,057,294	-		PS417_09500	0.57	+0.2
2,057,417	+		PS417_09500	0.74	+0.7
2,057,418	-		PS417_09500	0.74	-0.6
2,057,418	-		PS417_09500	0.74	+0.5
2,057,465	+		PS417_09500	0.80	-2.7
2,057,466	-		PS417_09500	0.80	+0.3
2,057,472	+		PS417_09500	0.81	-0.6
2,057,521	+		PS417_09500	0.88	+1.3
2,057,522	-		PS417_09500	0.88	+2.1
2,057,645	+				-1.8
2,057,722	+				-0.3
2,057,723	-				-2.3
2,057,726	+				+0.4
2,057,726	+				+0.0
2,057,727	-				+0.6
2,057,755	+		PS417_09505	0.12	-0.1