Strain Fitness in Pseudomonas simiae WCS417 around PS417_09480

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,051,603	+		PS417_09475	0.32	-1.6
2,051,886	-		PS417_09475	0.56	-0.6
2,052,124	+		PS417_09475	0.77	-0.1
2,052,124	+		PS417_09475	0.77	-0.7
2,052,286	+				+0.4
2,052,314	-				-0.7
2,052,314	-				-0.0
2,052,401	+				-0.3
2,052,402	-				+0.6
2,052,413	+				+0.2
2,052,414	-				+0.7
2,052,414	-				+0.3
2,052,416	+				+0.2
2,052,417	-				+0.7
2,052,450	-				-1.0
2,052,568	-				+1.8
2,052,939	+		PS417_09480	0.27	+0.9
2,052,940	-		PS417_09480	0.27	+0.6
2,053,476	-		PS417_09480	0.57	-0.2
2,053,537	+		PS417_09480	0.60	-2.4
2,053,537	+		PS417_09480	0.60	-2.3
2,053,538	-		PS417_09480	0.60	-1.1
2,053,538	-		PS417_09480	0.60	-0.4
2,053,538	-		PS417_09480	0.60	-0.6
2,053,566	+		PS417_09480	0.62	+0.6
2,053,593	+		PS417_09480	0.64	-0.9
2,053,854	+		PS417_09480	0.78	-0.2
2,053,855	-		PS417_09480	0.78	+0.5
2,053,879	+		PS417_09480	0.79	+1.1
2,054,292	+				+0.7
2,054,292	+				-0.5
2,054,293	-				-0.3
2,054,294	+				-0.2
2,054,294	+				-0.4
2,054,295	-				-0.0
2,054,295	-				-0.1
2,054,375	+		PS417_09485	0.14	-0.4
2,054,420	+		PS417_09485	0.19	+0.0
2,054,431	+		PS417_09485	0.20	-0.7
2,054,432	-		PS417_09485	0.21	+0.2
2,054,546	+		PS417_09485	0.33	+0.2
2,054,802	-		PS417_09485	0.61	-1.5
2,054,957	+		PS417_09485	0.78	-0.4
2,054,957	+		PS417_09485	0.78	-2.6
2,054,957	+		PS417_09485	0.78	+0.3
2,054,960	+		PS417_09485	0.79	-0.4
2,054,961	-		PS417_09485	0.79	+0.1
2,054,961	-		PS417_09485	0.79	-0.3
2,055,046	+		PS417_09485	0.88	-1.3
2,055,189	+				+0.7
2,055,191	+				+0.6
2,055,249	+				-0.8
2,055,249	+				-0.1
2,055,249	+				+1.1
2,055,249	+				-0.6
2,055,250	-				-0.7
2,055,250	-				+1.9