Strain Fitness in Pseudomonas simiae WCS417 around PS417_09225

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,002,605	-		PS417_09215	0.57	+0.2
2,002,940	+		PS417_09215	0.85	+0.6
2,002,940	+		PS417_09215	0.85	-0.4
2,002,941	-		PS417_09215	0.85	-0.2
2,002,941	-				+2.7
2,003,128	-				+0.5
2,003,128	-				-0.1
2,003,131	-				-1.1
2,003,394	+		PS417_09220	0.73	+0.5
2,003,394	+		PS417_09220	0.73	-0.3
2,003,546	-				+0.1
2,003,808	+		PS417_09225	0.19	-1.7
2,004,187	-		PS417_09225	0.52	-0.7
2,004,234	-		PS417_09225	0.56	+0.1
2,004,260	+		PS417_09225	0.59	-1.5
2,004,333	-		PS417_09225	0.65	-2.1
2,004,333	-		PS417_09225	0.65	-2.0
2,004,333	-		PS417_09225	0.65	+0.2
2,004,553	-		PS417_09225	0.84	-0.1
2,004,681	+				+0.7
2,004,682	-				-1.0
2,004,684	-				-0.3
2,004,732	+				+0.8
2,004,733	-				-1.4
2,004,742	+				-0.6
2,004,742	+				+1.0
2,004,743	-				-0.1
2,004,925	+				-0.8
2,004,925	+				+2.2
2,004,926	-				-0.6
2,004,955	-				-1.2
2,005,189	+		PS417_09230	0.21	-1.1
2,005,189	+				+0.7
2,005,576	+				-0.0
2,005,576	+		PS417_09230	0.41	-1.5
2,005,673	+		PS417_09230	0.46	-0.8
2,005,673	+		PS417_09230	0.46	+0.0