Strain Fitness in Pseudomonas simiae WCS417 around PS417_08275

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,810,146	+		PS417_08265	0.50	-0.3
1,810,146	+		PS417_08265	0.50	+0.2
1,810,147	-		PS417_08265	0.50	+1.1
1,810,147	-		PS417_08265	0.50	-0.5
1,810,147	-		PS417_08265	0.50	-3.6
1,810,292	+		PS417_08265	0.67	+0.1
1,810,296	+		PS417_08265	0.68	-0.8
1,810,296	+		PS417_08265	0.68	-0.5
1,810,296	+		PS417_08265	0.68	-1.1
1,810,296	+		PS417_08265	0.68	-1.5
1,810,296	+		PS417_08265	0.68	+0.3
1,810,296	+		PS417_08265	0.68	-0.1
1,810,297	-		PS417_08265	0.68	+1.0
1,810,297	-		PS417_08265	0.68	-0.2
1,810,333	-		PS417_08265	0.72	-0.8
1,810,441	+		PS417_08265	0.85	-1.8
1,810,467	+		PS417_08265	0.88	+0.8
1,810,467	+		PS417_08265	0.88	+0.3
1,810,467	+		PS417_08265	0.88	+0.6
1,810,468	-		PS417_08265	0.88	+0.2
1,810,468	-		PS417_08265	0.88	-0.4
1,810,468	-		PS417_08265	0.88	-0.1
1,810,469	+		PS417_08265	0.88	+0.5
1,810,469	+		PS417_08265	0.88	+0.8
1,810,469	+		PS417_08265	0.88	-1.1
1,810,470	-		PS417_08265	0.88	+3.7
1,810,521	+				+1.6
1,810,521	+				-0.3
1,810,521	+				-3.6
1,810,521	+				-0.3
1,810,522	-				+3.9
1,810,522	-				-1.1
1,810,522	-				-1.1
1,810,522	-				-0.1
1,810,734	+				-0.1
1,810,734	+				+2.0
1,810,734	+				+0.9
1,810,735	-				+1.0
1,810,744	+				-0.6
1,810,793	+				-1.5
1,810,793	+				+0.1
1,810,794	-				+2.5
1,811,116	+		PS417_08275	0.19	+0.4
1,811,117	-		PS417_08275	0.19	+2.6
1,811,117	-		PS417_08275	0.19	-0.0
1,811,117	-		PS417_08275	0.19	+1.0
1,811,200	+		PS417_08275	0.25	-0.6
1,811,201	-		PS417_08275	0.25	+0.0
1,811,201	-		PS417_08275	0.25	+0.3
1,811,201	-		PS417_08275	0.25	+0.1
1,811,201	-		PS417_08275	0.25	-2.7
1,811,539	+		PS417_08275	0.50	+1.4
1,811,836	+		PS417_08275	0.72	-2.3
1,811,836	+		PS417_08275	0.72	+0.1
1,811,837	-		PS417_08275	0.72	-0.8
1,812,064	+		PS417_08275	0.88	+0.2
1,812,064	+		PS417_08275	0.88	+0.4
1,812,064	+				+0.4
1,812,065	-		PS417_08275	0.88	+1.8
1,812,128	-				+3.4
1,812,142	+				-0.3
1,812,142	+				-0.1
1,812,298	-				+0.3
1,812,298	-				+0.2
1,812,330	+				-0.7
1,812,474	+				+0.0
1,812,644	+				-0.1
1,812,644	+				+2.9
1,812,645	-				+0.6
1,812,668	-				-1.5
1,812,703	+				-0.4
1,812,703	+				+0.3
1,812,724	+				+2.9
1,812,724	+				-0.2
1,812,725	-				+0.5
1,812,725	-				-0.6
1,812,793	+				+1.4
1,812,793	+				-1.3
1,812,794	-				-0.2
1,812,794	-				-0.1
1,812,794	-				+0.7
1,812,796	+				-1.1
1,812,797	-				-1.2
1,812,910	+		PS417_08285	0.12	+0.0
1,812,911	-				-0.6
1,812,982	+		PS417_08285	0.16	+0.4
1,812,983	-		PS417_08285	0.16	-1.4
1,813,103	-		PS417_08285	0.23	+0.6