Strain Fitness in Pseudomonas simiae WCS417 around PS417_07685

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,694,072	-		PS417_07680	0.73	-1.1
1,694,457	+				-0.2
1,694,458	-				-0.3
1,694,458	-				+1.6
1,694,500	+		PS417_07685	0.10	-0.2
1,694,545	+		PS417_07685	0.17	-0.6
1,694,820	+		PS417_07685	0.57	-0.3
1,694,821	-		PS417_07685	0.57	-0.3
1,694,885	+		PS417_07685	0.67	-0.5
1,694,886	-		PS417_07685	0.67	-0.8
1,694,979	+		PS417_07685	0.80	-1.5
1,695,069	+				+0.1
1,695,145	+				-0.6
1,695,145	+				-0.3
1,695,146	-				+1.1
1,695,148	-				+0.7
1,695,188	+				+0.2
1,695,188	+				+0.5
1,695,189	-				-0.5
1,695,189	-				+0.3
1,695,194	-				+1.7
1,695,226	-				+0.2
1,695,248	+				+1.2
1,695,248	+				+0.5
1,695,349	+		PS417_07690	0.16	+0.0
1,695,349	+		PS417_07690	0.16	+0.6
1,695,349	+		PS417_07690	0.16	-3.2
1,695,349	+		PS417_07690	0.16	-0.3
1,695,349	+		PS417_07690	0.16	-0.1
1,695,349	+				-0.6
1,695,350	-		PS417_07690	0.16	+2.5
1,695,390	+		PS417_07690	0.24	-1.6
1,695,654	-		PS417_07690	0.75	-0.0
1,695,670	-		PS417_07690	0.78	+0.1
1,695,742	+				-0.4
1,695,743	-				+1.1
1,695,834	+				+0.7
1,695,895	+				-0.0
1,695,895	+				-0.0
1,695,895	+				+1.9
1,695,895	+				-0.3
1,695,895	+				-0.2
1,695,896	-				-0.6
1,695,896	-				-0.2
1,695,896	-				+0.5
1,695,896	-				-0.1
1,695,896	-				-1.2
1,695,896	-				-1.2
1,695,907	+				+0.1
1,695,907	+				+0.0
1,695,908	-				+1.7
1,695,908	-				-0.0
1,695,908	-				-0.5
1,695,985	+		PS417_07695	0.16	-0.3
1,695,985	+		PS417_07695	0.16	+0.2