Strain Fitness in Pseudomonas simiae WCS417 around PS417_06640

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,470,343	+				-0.3
1,470,387	+				+1.0
1,470,387	+				-0.4
1,470,387	+				-0.7
1,470,387	+				+0.1
1,470,387	+				+0.0
1,470,388	-				+0.4
1,470,440	+				+0.5
1,470,440	+				+3.1
1,470,441	-				-0.3
1,470,441	-				-0.3
1,470,455	+				+0.1
1,470,500	+				-0.2
1,470,582	+				-0.7
1,470,583	-				+0.7
1,470,583	-				-0.6
1,470,726	+				+2.3
1,470,726	+		PS417_06635	0.40	+0.5
1,470,727	-		PS417_06635	0.40	-1.6
1,471,001	+				-1.4
1,471,001	+				-0.4
1,471,039	+				-0.6
1,471,041	+				+0.2
1,471,041	+				-0.4
1,471,041	+				+0.8
1,471,087	-				-0.5
1,471,130	+				+0.8
1,471,130	+				+0.9
1,471,130	+				+0.7
1,471,131	-				-0.3
1,471,131	-				-2.0
1,471,182	+				-1.5
1,471,182	+				+0.6
1,471,183	-				-0.8
1,471,546	+		PS417_06640	0.26	-0.3
1,471,660	-		PS417_06640	0.34	-2.1
1,471,710	+		PS417_06640	0.38	-0.5
1,471,753	+		PS417_06640	0.41	-1.0
1,471,753	+		PS417_06640	0.41	-1.2
1,471,753	+		PS417_06640	0.41	+0.3
1,471,754	-		PS417_06640	0.41	+0.2
1,471,894	+		PS417_06640	0.52	+0.1
1,471,895	-		PS417_06640	0.52	-2.0
1,471,933	+		PS417_06640	0.55	+0.4
1,471,934	-		PS417_06640	0.55	+0.1
1,472,183	-		PS417_06640	0.73	-2.5
1,472,183	-		PS417_06640	0.73	-1.1
1,472,185	-		PS417_06640	0.73	-0.1
1,472,203	+		PS417_06640	0.75	-0.5
1,472,204	-		PS417_06640	0.75	+1.3
1,472,275	+		PS417_06640	0.80	+0.5
1,472,347	+		PS417_06640	0.85	-0.5
1,472,347	+		PS417_06640	0.85	+0.2
1,472,347	+		PS417_06640	0.85	-1.4
1,472,380	+		PS417_06640	0.88	-0.2
1,472,380	+		PS417_06640	0.88	+1.6
1,472,380	+		PS417_06640	0.88	-0.1
1,472,381	-		PS417_06640	0.88	+0.2
1,472,382	+		PS417_06640	0.88	-1.1
1,472,382	+		PS417_06640	0.88	-2.1
1,472,383	-		PS417_06640	0.88	-0.4
1,472,383	-		PS417_06640	0.88	-0.8
1,472,383	-		PS417_06640	0.88	-1.6
1,472,383	-		PS417_06640	0.88	-0.0
1,472,383	-		PS417_06640	0.88	-0.6
1,472,411	-				-0.3
1,473,167	+		PS417_06645	0.16	+0.5
1,473,167	+		PS417_06645	0.16	-0.5
1,473,168	-		PS417_06645	0.16	+1.7
1,473,338	+		PS417_06645	0.22	+0.6
1,473,339	-		PS417_06645	0.22	-0.6
1,473,339	-		PS417_06645	0.22	-0.4
1,473,339	-		PS417_06645	0.22	-0.2
1,473,342	+		PS417_06645	0.22	-1.1
1,473,342	+		PS417_06645	0.22	-0.2
1,473,343	-		PS417_06645	0.22	-0.0
1,473,473	+		PS417_06645	0.26	-0.6
1,473,474	-		PS417_06645	0.26	-0.1