Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03695 and PS417_03700 are separated by 125 nucleotides PS417_03700 and PS417_03705 are separated by 110 nucleotides
PS417_03695: PS417_03695 - ferrochelatase, at 835,347 to 836,372
_03695
PS417_03700: PS417_03700 - TonB-dependent receptor, at 836,498 to 838,594
_03700
PS417_03705: PS417_03705 - 2-alkenal reductase, at 838,705 to 839,859
_03705
Position (kb) 836
837
838
839 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 836.370 kb on + strand at 836.370 kb on + strand at 836.371 kb on - strand at 836.506 kb on + strand at 836.577 kb on + strand at 836.577 kb on + strand at 836.577 kb on + strand at 836.581 kb on - strand at 836.640 kb on + strand at 836.640 kb on + strand at 836.640 kb on + strand at 836.719 kb on - strand, within PS417_03700 at 836.719 kb on - strand, within PS417_03700 at 836.868 kb on + strand, within PS417_03700 at 836.869 kb on - strand, within PS417_03700 at 836.869 kb on - strand, within PS417_03700 at 836.903 kb on + strand, within PS417_03700 at 836.903 kb on + strand, within PS417_03700 at 836.904 kb on - strand, within PS417_03700 at 836.904 kb on - strand, within PS417_03700 at 836.991 kb on - strand, within PS417_03700 at 837.420 kb on + strand, within PS417_03700 at 837.604 kb on + strand, within PS417_03700 at 837.605 kb on - strand, within PS417_03700 at 837.669 kb on + strand, within PS417_03700 at 837.669 kb on + strand, within PS417_03700 at 838.060 kb on + strand, within PS417_03700 at 838.061 kb on - strand, within PS417_03700 at 838.061 kb on - strand, within PS417_03700 at 838.128 kb on + strand, within PS417_03700 at 838.227 kb on + strand, within PS417_03700 at 838.227 kb on + strand, within PS417_03700 at 838.228 kb on - strand, within PS417_03700 at 838.261 kb on - strand, within PS417_03700 at 838.267 kb on - strand, within PS417_03700 at 838.476 kb on + strand at 838.476 kb on + strand at 838.477 kb on - strand at 838.597 kb on + strand at 838.597 kb on + strand at 838.597 kb on + strand at 838.598 kb on - strand at 838.670 kb on + strand at 838.670 kb on + strand at 838.670 kb on + strand at 838.670 kb on + strand at 838.670 kb on + strand at 838.671 kb on - strand at 838.671 kb on - strand at 838.706 kb on + strand at 838.707 kb on - strand at 838.792 kb on + strand at 838.792 kb on + strand at 839.510 kb on + strand, within PS417_03705
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Polymyxin B sulfate 0.003 mg/ml remove 836,370 + -0.3 836,370 + +0.0 836,371 - +0.6 836,506 + +0.3 836,577 + +0.2 836,577 + +0.3 836,577 + +0.5 836,581 - -0.0 836,640 + -0.3 836,640 + +0.4 836,640 + +1.4 836,719 - PS417_03700 0.11 -0.4 836,719 - PS417_03700 0.11 +1.6 836,868 + PS417_03700 0.18 +0.3 836,869 - PS417_03700 0.18 +1.1 836,869 - PS417_03700 0.18 -1.8 836,903 + PS417_03700 0.19 -1.0 836,903 + PS417_03700 0.19 +1.6 836,904 - PS417_03700 0.19 -1.4 836,904 - PS417_03700 0.19 -0.7 836,991 - PS417_03700 0.24 -0.4 837,420 + PS417_03700 0.44 +0.5 837,604 + PS417_03700 0.53 -1.0 837,605 - PS417_03700 0.53 +0.8 837,669 + PS417_03700 0.56 -0.2 837,669 + PS417_03700 0.56 +0.9 838,060 + PS417_03700 0.74 -0.4 838,061 - PS417_03700 0.75 +3.3 838,061 - PS417_03700 0.75 +0.5 838,128 + PS417_03700 0.78 -0.1 838,227 + PS417_03700 0.82 -0.2 838,227 + PS417_03700 0.82 -0.6 838,228 - PS417_03700 0.82 +2.0 838,261 - PS417_03700 0.84 -0.4 838,267 - PS417_03700 0.84 +0.1 838,476 + -1.4 838,476 + -1.7 838,477 - -1.5 838,597 + -2.2 838,597 + +0.9 838,597 + -0.2 838,598 - -0.7 838,670 + -0.2 838,670 + -0.5 838,670 + +0.9 838,670 + +1.2 838,670 + +1.4 838,671 - -1.9 838,671 - +0.6 838,706 + +0.7 838,707 - -0.0 838,792 + -0.2 838,792 + +4.1 839,510 + PS417_03705 0.70 -0.9
Or see this region's nucleotide sequence