Strain Fitness in Pseudomonas simiae WCS417 around PS417_03450
Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | R2A with Polymyxin B sulfate 0.003 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 792,207 | + | -2.4 | |||
| 792,466 | - | +1.4 | |||
| 792,466 | - | -0.3 | |||
| 792,466 | - | +0.9 | |||
| 792,633 | + | +1.4 | |||
| 792,634 | - | -1.3 | |||
| 792,634 | - | +1.6 | |||
| 793,235 | + | PS417_03450 | 0.14 | +0.8 | |
| 793,294 | + | PS417_03450 | 0.25 | +0.4 | |
| 793,488 | - | PS417_03450 | 0.60 | -1.5 | |
| 793,555 | + | PS417_03450 | 0.72 | +0.8 | |
| 793,727 | - | +0.0 | |||
| 793,762 | + | -0.9 | |||
| 793,856 | + | +0.4 | |||
| 793,856 | + | -0.0 | |||
| 793,856 | + | +0.0 | |||
| 794,321 | + | PS417_03455 | 0.33 | +1.8 | |
| 794,321 | + | PS417_03455 | 0.33 | +0.8 | |
| 794,322 | - | PS417_03455 | 0.33 | +0.0 |
Or see this region's nucleotide sequence