Strain Fitness in Pseudomonas simiae WCS417 around PS417_27130

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,855,680	-		PS417_27125	0.37	-0.1
5,855,680	-		PS417_27125	0.37	-0.8
5,855,705	+		PS417_27125	0.39	-1.0
5,855,705	+		PS417_27125	0.39	+5.3
5,855,705	+		PS417_27125	0.39	-0.9
5,855,706	-		PS417_27125	0.39	-0.8
5,855,706	-		PS417_27125	0.39	-1.8
5,855,811	-		PS417_27125	0.49	-0.9
5,855,811	-		PS417_27125	0.49	-1.3
5,855,811	-		PS417_27125	0.49	+1.5
5,855,988	-		PS417_27125	0.65	-1.1
5,855,988	-		PS417_27125	0.65	-0.3
5,855,988	-		PS417_27125	0.65	+0.4
5,855,988	-				-1.1
5,856,060	-		PS417_27125	0.71	-2.2
5,856,092	+		PS417_27125	0.74	-2.7
5,856,137	-		PS417_27125	0.78	+0.4
5,856,209	+		PS417_27125	0.85	-1.5
5,856,209	+		PS417_27125	0.85	+0.1
5,856,210	-		PS417_27125	0.85	-1.0
5,856,281	+				-1.6
5,856,431	+				-0.6
5,856,431	+				-0.5
5,856,431	+				-1.3
5,856,432	-				+0.1
5,856,432	-				+0.2
5,856,572	+				+0.5
5,856,804	+		PS417_27130	0.17	-1.8
5,856,869	+		PS417_27130	0.22	-0.2
5,856,869	+		PS417_27130	0.22	-0.6
5,856,969	-		PS417_27130	0.29	+1.5
5,857,052	+		PS417_27130	0.35	+0.1
5,857,178	+		PS417_27130	0.44	-2.5
5,857,178	+		PS417_27130	0.44	+0.2
5,857,178	+		PS417_27130	0.44	+1.2
5,857,178	+		PS417_27130	0.44	+0.4
5,857,178	+		PS417_27130	0.44	-0.2
5,857,263	+		PS417_27130	0.51	-0.6
5,857,327	+		PS417_27130	0.55	-1.5
5,857,327	+		PS417_27130	0.55	-0.2
5,857,327	+		PS417_27130	0.55	-2.1
5,857,328	-		PS417_27130	0.55	-2.2
5,857,428	+		PS417_27130	0.63	-1.8
5,857,428	+		PS417_27130	0.63	-0.1
5,857,429	-		PS417_27130	0.63	+0.1
5,857,430	+		PS417_27130	0.63	+0.2
5,857,430	+		PS417_27130	0.63	-1.3
5,857,430	+		PS417_27130	0.63	-0.3
5,857,430	+		PS417_27130	0.63	+0.3
5,857,430	+		PS417_27130	0.63	+1.2
5,857,430	+		PS417_27130	0.63	-2.3
5,857,430	+		PS417_27130	0.63	-0.5
5,857,430	+		PS417_27130	0.63	+0.1
5,857,431	-		PS417_27130	0.63	-0.5
5,857,431	-		PS417_27130	0.63	-0.1
5,857,431	-		PS417_27130	0.63	-0.5
5,857,431	-		PS417_27130	0.63	-0.1
5,857,431	-		PS417_27130	0.63	-0.7
5,857,431	-		PS417_27130	0.63	+0.1
5,857,431	-		PS417_27130	0.63	+0.2
5,857,431	-		PS417_27130	0.63	-0.5
5,857,679	+		PS417_27130	0.81	-0.5
5,857,680	-		PS417_27130	0.81	-0.5
5,857,680	-		PS417_27130	0.81	-1.5
5,857,680	-		PS417_27130	0.81	-0.1
5,857,806	-				+0.1
5,857,806	-				+0.6
5,857,936	-				-0.5
5,857,936	-				+0.7
5,857,936	-				+0.3
5,857,947	-				-1.0
5,858,828	+		PS417_27135	0.61	-1.5