Strain Fitness in Pseudomonas simiae WCS417 around PS417_25015

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,424,784	+				+0.2
5,424,785	-				+1.0
5,424,835	-				-0.3
5,424,868	+				-0.0
5,424,891	+				+1.5
5,424,940	+				+0.1
5,424,976	+				+1.4
5,425,070	-				+2.8
5,425,180	+				-1.5
5,425,182	+				-1.4
5,425,403	+				+0.6
5,425,403	+				-0.5
5,425,414	+				+0.0
5,425,630	+				+0.8
5,425,638	-				+0.3
5,425,652	+				-0.2
5,425,663	+				-1.0
5,425,663	+				-0.5
5,425,709	+				+0.3
5,425,709	+				+0.2
5,425,787	-		PS417_25015	0.15	+1.1
5,425,787	-		PS417_25015	0.15	+3.3
5,425,790	+		PS417_25015	0.15	+0.1
5,425,809	+		PS417_25015	0.19	+0.0
5,425,809	+		PS417_25015	0.19	+0.2
5,425,843	-		PS417_25015	0.25	+1.6
5,425,843	-		PS417_25015	0.25	+1.3
5,425,975	-		PS417_25015	0.51	+1.2
5,425,990	+		PS417_25015	0.53	-0.6
5,425,990	+		PS417_25015	0.53	-0.8
5,426,011	+		PS417_25015	0.57	-0.3
5,426,012	-		PS417_25015	0.58	+0.3
5,426,067	+		PS417_25015	0.68	-0.1
5,426,110	-		PS417_25015	0.76	+1.4
5,426,130	+				-1.9
5,426,130	+		PS417_25015	0.80	+1.0
5,426,131	-		PS417_25015	0.80	+2.0
5,426,219	-				+0.9
5,426,349	+				-0.0
5,426,349	+				-2.7
5,426,349	+				-3.8
5,426,349	+				+0.2
5,426,465	+				+0.2
5,426,718	+				+0.2
5,426,982	+				-2.6
5,427,083	+				-0.5
5,427,084	-				+1.0
5,427,084	-				+0.2
5,427,124	+				-0.4
5,427,124	+				-0.6
5,427,188	+				+0.6
5,427,188	+				-0.5
5,427,189	-				+1.3
5,427,189	-				+0.7
5,427,189	-				+2.7
5,427,218	-				+0.1