Strain Fitness in Pseudomonas simiae WCS417 around PS417_24575

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,331,475	+				+1.4
5,331,481	+				+0.0
5,331,739	+		PS417_24570	0.30	+0.5
5,331,739	+		PS417_24570	0.30	-1.9
5,331,739	+		PS417_24570	0.30	-1.4
5,331,739	+		PS417_24570	0.30	+1.0
5,331,740	-		PS417_24570	0.30	+0.2
5,331,740	-		PS417_24570	0.30	-0.7
5,331,800	-		PS417_24570	0.43	-0.0
5,332,089	+				-0.1
5,332,089	+				-0.6
5,332,089	+				-0.6
5,332,090	-				+0.3
5,332,090	-				+0.5
5,332,090	-				+1.2
5,332,143	+				-0.3
5,332,143	+				-0.2
5,332,144	-				-1.5
5,332,144	-				-1.4
5,332,144	-				-0.1
5,332,144	-				-1.3
5,332,235	+				-1.1
5,332,237	+				-0.3
5,332,349	-		PS417_24575	0.34	+1.2
5,332,483	-				-1.6
5,332,483	-				-0.9
5,332,484	+				+0.6
5,332,485	-				-1.1
5,332,485	-				+0.2
5,332,485	-				-0.7
5,332,601	+		PS417_24580	0.19	+1.6
5,332,613	-		PS417_24580	0.21	+0.8
5,332,644	+		PS417_24580	0.26	-3.3
5,332,653	-		PS417_24580	0.27	-0.8
5,333,002	+		PS417_24580	0.82	+2.4
5,333,132	-				+0.3
5,333,169	-				+2.0
5,333,309	+				-0.6
5,333,309	+				+0.3
5,333,310	-				-0.5