Strain Fitness in Pseudomonas simiae WCS417 around PS417_02020

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
451,182	+		PS417_02015	0.32	-1.1
451,182	+		PS417_02015	0.32	-2.8
451,182	+		PS417_02015	0.32	-0.2
451,182	+		PS417_02015	0.32	+0.2
451,183	-		PS417_02015	0.32	-0.9
451,187	-		PS417_02015	0.32	+0.2
451,197	+		PS417_02015	0.33	-0.5
451,198	-		PS417_02015	0.33	-0.3
451,198	-		PS417_02015	0.33	-0.1
451,240	-		PS417_02015	0.36	+0.3
451,269	+		PS417_02015	0.38	+0.1
451,269	+		PS417_02015	0.38	-0.3
451,270	-		PS417_02015	0.39	-0.3
451,270	-		PS417_02015	0.39	-1.4
451,554	+		PS417_02015	0.61	-0.8
451,555	-		PS417_02015	0.61	+0.5
451,555	-		PS417_02015	0.61	-0.2
451,555	-		PS417_02015	0.61	+0.7
451,555	-		PS417_02015	0.61	-1.0
451,606	-		PS417_02015	0.65	-0.1
451,606	-		PS417_02015	0.65	+1.4
451,665	-		PS417_02015	0.69	-0.6
451,891	-		PS417_02015	0.87	-1.5
451,971	+				+2.1
451,994	+				-1.8
451,994	+				-0.8
451,995	-				+0.5
452,103	+				-0.9
452,103	+				-0.0
452,103	+				+0.1
452,104	-				-0.4
452,105	+				-2.2
452,105	+				-0.4
452,105	+				+0.0
452,106	-				+0.3
452,106	-				-0.4
452,106	-				+0.9
452,106	-				-0.3
452,106	-				-1.7
452,130	-				+1.1
452,284	-		PS417_02020	0.12	+0.4
452,418	+		PS417_02020	0.27	-0.7
452,419	-		PS417_02020	0.27	-1.6
452,486	-		PS417_02020	0.35	-1.6
452,793	-		PS417_02020	0.69	-1.4
452,922	-		PS417_02020	0.83	-1.6
452,951	+		PS417_02020	0.87	-1.9
452,951	+		PS417_02020	0.87	+0.2
452,989	-				-0.9