Strain Fitness in Pseudomonas simiae WCS417 around PS417_14290

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,125,422	+				+0.5
3,125,422	+				+0.6
3,125,504	-				+2.2
3,125,516	+		PS417_14285	0.10	-0.7
3,125,517	-		PS417_14285	0.11	+0.6
3,125,782	-		PS417_14285	0.45	+0.4
3,125,917	-		PS417_14285	0.62	-1.1
3,125,919	+		PS417_14285	0.62	+1.4
3,125,919	+		PS417_14285	0.62	-0.7
3,125,919	+		PS417_14285	0.62	+0.6
3,125,920	-		PS417_14285	0.62	+0.6
3,125,984	-		PS417_14285	0.71	+1.0
3,126,086	+		PS417_14285	0.84	-0.2
3,126,149	+				-0.2
3,126,177	-				+1.3
3,126,236	+				-0.2
3,126,251	-				-0.4
3,126,291	+				-3.2
3,126,404	-				+0.7
3,126,422	+				+0.4
3,126,650	-		PS417_14290	0.14	-0.9
3,126,752	+		PS417_14290	0.19	+0.4
3,126,753	-		PS417_14290	0.19	-2.1
3,126,929	-		PS417_14290	0.28	+1.7
3,126,929	-		PS417_14290	0.28	-0.0
3,126,929	-		PS417_14290	0.28	+0.4
3,126,929	-		PS417_14290	0.28	+0.4
3,127,099	+		PS417_14290	0.36	+3.2
3,127,100	-		PS417_14290	0.36	-0.6
3,127,100	-		PS417_14290	0.36	-0.3
3,127,422	-		PS417_14290	0.51	+1.4
3,127,469	+		PS417_14290	0.54	-0.3
3,127,663	+		PS417_14290	0.63	+0.8
3,127,672	+		PS417_14290	0.64	+1.4
3,127,786	+		PS417_14290	0.69	-0.1
3,127,786	+		PS417_14290	0.69	-1.2
3,127,787	-		PS417_14290	0.69	+0.2
3,127,921	+		PS417_14290	0.76	-2.2
3,127,921	+		PS417_14290	0.76	+1.5
3,127,922	-		PS417_14290	0.76	+0.8
3,128,259	-				-1.1
3,128,432	+				-0.2
3,128,445	-				+0.1
3,128,464	+				+0.4
3,128,464	+				+0.0
3,128,464	+				+0.0
3,128,464	+				-2.0
3,128,465	-				-0.1
3,128,465	-				+0.1
3,128,465	-				-0.4
3,128,570	+				+1.0
3,128,570	+				+0.1
3,128,570	+				-0.5
3,128,571	-				-2.7
3,129,026	+		PS417_14295	0.51	+1.5
3,129,027	-		PS417_14295	0.51	-1.2
3,129,313	+		PS417_14295	0.89	+1.1
3,129,314	-		PS417_14295	0.89	-0.3
3,129,334	+				-0.0
3,129,334	+				-0.2
3,129,335	-				-0.6