Strain Fitness in Pseudomonas simiae WCS417 around PS417_13395

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,944,659	+		PS417_13390	0.38	-0.0
2,944,681	-		PS417_13390	0.39	+3.8
2,944,938	-		PS417_13390	0.58	-1.8
2,945,085	-		PS417_13390	0.68	+1.2
2,945,085	-		PS417_13390	0.68	-0.2
2,945,232	+		PS417_13390	0.79	-0.2
2,945,294	+				-0.9
2,945,295	-		PS417_13390	0.83	-0.1
2,945,361	+		PS417_13390	0.88	+0.2
2,945,559	+				-0.4
2,945,637	-				-1.0
2,945,717	-				-0.4
2,945,719	+				+0.2
2,945,720	-				+0.2
2,945,720	-				-0.3
2,945,841	+		PS417_13395	0.12	-0.7
2,945,842	-		PS417_13395	0.12	-0.0
2,945,842	-		PS417_13395	0.12	-1.3
2,946,028	+		PS417_13395	0.24	-0.4
2,946,029	-		PS417_13395	0.24	-1.1
2,946,112	+		PS417_13395	0.29	-0.8
2,946,112	+		PS417_13395	0.29	-0.6
2,946,113	-				-0.5
2,946,113	-		PS417_13395	0.29	-1.3
2,946,263	-		PS417_13395	0.38	+0.9
2,946,274	+		PS417_13395	0.39	-1.0
2,946,274	+		PS417_13395	0.39	-0.6
2,946,274	+		PS417_13395	0.39	-1.5
2,946,274	+		PS417_13395	0.39	-1.4
2,946,274	+		PS417_13395	0.39	-1.5
2,946,274	+		PS417_13395	0.39	-0.0
2,946,275	-		PS417_13395	0.39	+0.1
2,946,275	-		PS417_13395	0.39	-2.1
2,946,275	-		PS417_13395	0.39	-0.5
2,946,275	-		PS417_13395	0.39	-0.2
2,946,275	-		PS417_13395	0.39	-1.6
2,946,497	-		PS417_13395	0.52	-0.6
2,946,617	-		PS417_13395	0.59	+0.3
2,946,637	+		PS417_13395	0.61	-0.7
2,946,746	-		PS417_13395	0.67	+0.5
2,946,944	-		PS417_13395	0.79	+3.6
2,947,189	+				-1.8
2,947,189	+				+0.1
2,947,190	-				-2.6
2,947,190	-				-0.3
2,947,190	-				-0.7
2,947,190	-				+0.4
2,947,190	-				-1.0
2,947,190	-				-0.1
2,947,190	-				-0.2
2,947,198	+				-2.2
2,947,199	-				-0.6
2,947,199	-				+1.2
2,947,199	-				-2.5
2,947,283	-				+0.5
2,947,283	-				+0.9
2,947,296	+				-0.3
2,947,490	-		PS417_13400	0.20	+0.9
2,947,736	-		PS417_13400	0.55	+0.6
2,947,776	+		PS417_13400	0.61	-1.0
2,947,776	+		PS417_13400	0.61	-0.1
2,947,777	-		PS417_13400	0.61	+0.5
2,947,777	-		PS417_13400	0.61	-1.1
2,947,846	+		PS417_13400	0.71	+0.7
2,947,846	+		PS417_13400	0.71	+1.3
2,947,847	-		PS417_13400	0.71	-0.8
2,947,847	-		PS417_13400	0.71	+1.8
2,947,905	-		PS417_13400	0.80	-2.2
2,948,068	+				-0.7