Strain Fitness in Pseudomonas simiae WCS417 around PS417_13065

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,854,819	+		PS417_13060	0.61	+0.8
2,854,925	+		PS417_13060	0.67	+1.2
2,854,925	+		PS417_13060	0.67	+1.4
2,854,930	-		PS417_13060	0.67	-0.2
2,854,930	-		PS417_13060	0.67	+0.2
2,854,978	-		PS417_13060	0.70	-0.3
2,854,978	-		PS417_13060	0.70	+0.2
2,854,978	-		PS417_13060	0.70	+0.8
2,854,978	-		PS417_13060	0.70	+0.5
2,855,184	+		PS417_13060	0.83	+1.3
2,855,184	+		PS417_13060	0.83	+1.2
2,855,281	-		PS417_13060	0.89	+0.2
2,855,377	+				+1.8
2,855,443	+				+1.9
2,855,443	+				+3.7
2,855,444	-				-2.6
2,855,556	+				+1.9
2,855,557	-				-2.6
2,855,657	-				-0.9
2,855,928	+		PS417_13065	0.30	-1.9
2,856,001	+		PS417_13065	0.39	-2.4
2,856,002	-		PS417_13065	0.39	-1.0
2,856,284	-		PS417_13065	0.73	+0.1
2,856,415	+		PS417_13065	0.88	-3.5
2,856,416	-		PS417_13065	0.89	-1.9
2,856,416	-				-0.9
2,856,452	+				-3.9
2,857,057	-				+0.6
2,857,057	-				-0.1
2,857,060	+				-0.4
2,857,082	+				+0.5
2,857,086	+				+1.4
2,857,087	-				-1.9
2,857,152	+				-0.8
2,857,152	+				-2.0
2,857,153	-				+0.1
2,857,153	-				+0.4
2,857,174	-				-1.5
2,857,251	+				+3.2
2,857,251	+				+2.4
2,857,251	+				-0.1
2,857,252	-				+0.1
2,857,252	-				-0.2
2,857,255	+				-1.0
2,857,256	-				+0.0
2,857,256	-				+0.2