Strain Fitness in Pseudomonas simiae WCS417 around PS417_12820

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,805,464	+		PS417_12815	0.83	+0.5
2,805,480	-		PS417_12815	0.83	-0.7
2,805,533	+		PS417_12815	0.86	-1.1
2,805,534	-		PS417_12815	0.86	-0.1
2,805,534	-		PS417_12815	0.86	-1.0
2,805,534	-		PS417_12815	0.86	-2.0
2,805,665	+				-1.6
2,805,665	+				-0.9
2,805,666	-				-0.2
2,805,666	-				+0.9
2,805,894	-				-0.3
2,805,894	-				-2.3
2,805,898	-				-0.2
2,805,898	-				+0.7
2,805,995	-				-0.0
2,806,055	-				-0.4
2,806,189	+		PS417_12820	0.23	-1.0
2,806,887	+				-2.1
2,807,021	+				+1.2
2,807,021	+				-0.5
2,807,032	+				+0.4
2,807,032	+				+0.0
2,807,254	+		PS417_12825	0.27	+0.8
2,807,255	-		PS417_12825	0.27	+1.2
2,807,262	+		PS417_12825	0.28	+0.2
2,807,263	-		PS417_12825	0.28	-0.4
2,807,452	+		PS417_12825	0.43	-1.8
2,807,452	+		PS417_12825	0.43	-2.0
2,807,452	+		PS417_12825	0.43	+0.3
2,807,538	+		PS417_12825	0.50	-1.5
2,807,599	+		PS417_12825	0.55	+0.0
2,807,599	+		PS417_12825	0.55	+2.0
2,807,599	+		PS417_12825	0.55	-0.5