Strain Fitness in Pseudomonas simiae WCS417 around PS417_12585

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,737,085	+				-2.5
2,737,085	+				+0.2
2,737,086	-				+1.3
2,737,086	-				+1.3
2,737,124	-				-1.5
2,737,165	-				+0.5
2,737,327	-		PS417_12580	0.29	-1.4
2,737,377	-		PS417_12580	0.37	-1.2
2,737,377	-		PS417_12580	0.37	+0.7
2,737,377	-		PS417_12580	0.37	+0.5
2,737,380	-		PS417_12580	0.37	-1.5
2,737,392	-		PS417_12580	0.39	-0.0
2,737,600	+		PS417_12580	0.71	-0.5
2,737,649	+		PS417_12580	0.79	-0.4
2,737,650	-		PS417_12580	0.79	-2.3
2,737,650	-		PS417_12580	0.79	+0.4
2,737,802	+				+2.4
2,737,803	-				+0.1
2,737,866	-				+1.2
2,738,036	-				+1.4
2,738,325	-		PS417_12585	0.13	-3.3
2,739,322	-		PS417_12585	0.45	-2.9
2,739,399	+		PS417_12585	0.47	-2.9
2,739,400	-		PS417_12585	0.47	-2.1
2,739,454	-		PS417_12585	0.49	-2.9
2,739,454	-		PS417_12585	0.49	-3.9
2,739,631	-		PS417_12585	0.55	-0.9
2,739,937	+		PS417_12585	0.65	-2.5
2,739,937	+				-1.2
2,739,937	+		PS417_12585	0.65	-1.2
2,740,004	-		PS417_12585	0.67	-0.8
2,740,005	+		PS417_12585	0.67	-2.1
2,740,005	+		PS417_12585	0.67	-3.0
2,740,005	+		PS417_12585	0.67	-4.4
2,740,005	+		PS417_12585	0.67	-2.9
2,740,006	-		PS417_12585	0.67	-0.7
2,740,006	-		PS417_12585	0.67	-2.0
2,740,006	-		PS417_12585	0.67	-2.2
2,740,063	-		PS417_12585	0.69	-0.9
2,740,158	-		PS417_12585	0.72	-2.4
2,740,206	+		PS417_12585	0.73	-0.2
2,740,497	+		PS417_12585	0.83	-2.3
2,740,798	-				-0.5
2,740,882	-				-1.5
2,740,884	-				-0.9
2,740,890	+				-3.2
2,741,012	-				-1.9