Strain Fitness in Pseudomonas simiae WCS417 around PS417_12425

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,700,898	+				+0.4
2,700,899	-				-0.8
2,701,094	+				-1.0
2,701,095	-				-0.3
2,701,109	-				+0.4
2,701,109	-				+0.6
2,701,129	+				-2.6
2,701,130	-				+1.0
2,701,130	-				+0.4
2,701,186	+				+0.1
2,701,188	+				+0.9
2,701,189	-				-0.0
2,701,970	+				-0.3
2,701,980	-				-1.6
2,702,045	-				+0.4
2,702,159	+				-1.4
2,702,207	-				-1.6
2,702,280	-				-0.9
2,702,280	-				-2.3
2,702,280	-				+0.8
2,702,395	+		PS417_12430	0.13	-0.0
2,702,395	+		PS417_12430	0.13	+0.1
2,702,396	-		PS417_12430	0.13	+0.3
2,702,507	+		PS417_12430	0.18	-0.2
2,702,507	+		PS417_12430	0.18	+0.1
2,702,507	+		PS417_12430	0.18	+0.1
2,702,508	-				-1.0
2,702,508	-				+4.0
2,702,508	-		PS417_12430	0.18	+2.0
2,702,508	-		PS417_12430	0.18	-0.0
2,702,590	-		PS417_12430	0.22	-1.4
2,702,604	-		PS417_12430	0.22	-0.4
2,702,766	-		PS417_12430	0.29	-1.3
2,702,813	+		PS417_12430	0.32	-0.5
2,702,813	+		PS417_12430	0.32	-0.9
2,702,822	+		PS417_12430	0.32	-1.8
2,702,822	+		PS417_12430	0.32	+0.3
2,702,832	-		PS417_12430	0.32	+1.6
2,702,832	-		PS417_12430	0.32	+1.8
2,702,832	-		PS417_12430	0.32	-0.0
2,702,855	-		PS417_12430	0.33	+0.2
2,702,855	-		PS417_12430	0.33	+1.4
2,702,934	-		PS417_12430	0.37	+0.5