Strain Fitness in Pseudomonas simiae WCS417 around PS417_11445

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,462,683	+				-1.0
2,462,683	+				+1.0
2,462,683	+				+0.5
2,463,020	+		PS417_11440	0.41	+0.5
2,463,332	+		PS417_11440	0.74	-0.4
2,463,333	-		PS417_11440	0.74	+4.1
2,463,599	+				-0.2
2,463,665	-				+0.9
2,463,949	+		PS417_11445	0.36	+0.4
2,463,950	-		PS417_11445	0.37	+1.9
2,464,001	+		PS417_11445	0.43	+0.4
2,464,036	+		PS417_11445	0.47	+0.4
2,464,037	-		PS417_11445	0.48	+1.4
2,464,289	-		PS417_11445	0.80	+1.4
2,464,317	+		PS417_11445	0.83	-0.4
2,464,417	-				-0.1
2,464,422	+				-0.4
2,464,536	+				-1.2
2,464,654	+		PS417_11450	0.12	-0.9
2,464,655	-		PS417_11450	0.12	+0.1
2,464,679	+		PS417_11450	0.15	+0.4
2,464,814	+		PS417_11450	0.32	+0.3
2,464,815	-		PS417_11450	0.32	+0.6
2,464,896	+		PS417_11450	0.43	-1.0
2,464,897	-		PS417_11450	0.43	+0.9
2,465,318	+				-0.9
2,465,422	+				-0.1
2,465,423	-				-2.7