Strain Fitness in Pseudomonas simiae WCS417 around PS417_10755

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,295,750	+		PS417_10745	0.34	+0.3
2,295,750	+		PS417_10745	0.34	-0.4
2,295,751	-		PS417_10745	0.35	+0.6
2,295,835	+		PS417_10745	0.47	-0.3
2,295,835	+		PS417_10745	0.47	+0.0
2,295,836	-				+0.7
2,295,869	+		PS417_10745	0.52	+0.5
2,295,869	+		PS417_10745	0.52	-2.0
2,295,870	-				-1.7
2,296,092	+		PS417_10745	0.85	+1.0
2,296,092	+		PS417_10745	0.85	+1.4
2,296,092	+		PS417_10745	0.85	+1.8
2,296,093	-		PS417_10745	0.85	+0.8
2,296,093	-		PS417_10745	0.85	-0.3
2,296,093	-		PS417_10745	0.85	+1.0
2,296,184	-				-0.5
2,296,223	+				-2.3
2,296,321	-				+2.6
2,296,321	-				-0.7
2,296,364	+		PS417_10750	0.14	+0.3
2,296,364	+		PS417_10750	0.14	-0.1
2,296,364	+		PS417_10750	0.14	-1.4
2,296,364	+		PS417_10750	0.14	+1.1
2,296,365	-		PS417_10750	0.14	+0.2
2,296,408	+		PS417_10750	0.28	-1.3
2,296,561	+		PS417_10750	0.78	+1.0
2,296,561	+		PS417_10750	0.78	+0.6
2,296,562	-		PS417_10750	0.78	-0.3
2,296,568	-				-0.2
2,296,568	-		PS417_10750	0.80	+0.3
2,296,571	+		PS417_10750	0.81	-1.4
2,296,571	+		PS417_10750	0.81	+0.9
2,296,572	-		PS417_10750	0.82	+1.6
2,296,572	-		PS417_10750	0.82	-0.2
2,296,572	-		PS417_10750	0.82	-0.4
2,296,595	-		PS417_10750	0.89	+0.7
2,296,604	+				+0.6
2,296,605	-				+1.3
2,296,605	-				+1.9
2,296,605	-				-2.6
2,296,609	-				+0.3
2,296,609	-				+0.6
2,296,615	-				-0.7
2,296,638	+				+0.3
2,296,691	+				+0.7
2,296,713	+				+0.1
2,296,750	-				+1.9
2,296,772	-				-1.2
2,296,789	+		PS417_10755	0.15	-0.6
2,296,937	+		PS417_10755	0.55	+0.4
2,296,937	+		PS417_10755	0.55	-0.1
2,297,103	-				+0.8
2,297,148	-				+0.2
2,297,158	+				+0.3
2,297,217	-				-1.8
2,297,250	+				+1.0
2,297,301	+				-0.0
2,297,340	-				+0.5
2,297,340	-				+0.5
2,297,776	+				+0.2
2,297,838	+				-0.4
2,297,999	-				+0.3
2,298,011	+				-3.2
2,298,096	+				-0.4