Strain Fitness in Pseudomonas simiae WCS417 around PS417_10565

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,254,504	+		PS417_10560	0.48	-0.8
2,254,505	-		PS417_10560	0.49	-0.1
2,254,505	-		PS417_10560	0.49	+0.2
2,254,525	-		PS417_10560	0.50	-1.6
2,254,765	+		PS417_10560	0.64	+1.1
2,255,034	-		PS417_10560	0.81	+0.6
2,255,057	+		PS417_10560	0.82	+1.2
2,255,057	+		PS417_10560	0.82	-0.2
2,255,058	-		PS417_10560	0.82	+0.8
2,255,058	-		PS417_10560	0.82	-0.1
2,255,193	-				-1.4
2,255,324	+				-0.6
2,255,325	-				+1.5
2,255,325	-				-0.7
2,255,340	+				+0.1
2,255,388	+				+0.4
2,255,388	+				-0.6
2,255,389	-				-0.2
2,255,481	-				-0.4
2,255,973	+		PS417_10565	0.55	-2.0
2,255,988	+		PS417_10565	0.57	-2.5
2,255,988	+		PS417_10565	0.57	-0.0
2,255,989	-		PS417_10565	0.57	+0.1
2,255,989	-		PS417_10565	0.57	-0.4
2,256,051	+		PS417_10565	0.64	-0.2
2,256,318	+				-0.2
2,256,553	-				+0.3
2,256,621	+		PS417_10570	0.13	-0.5
2,256,621	+		PS417_10570	0.13	+0.1
2,256,622	-		PS417_10570	0.13	+0.7
2,256,622	-		PS417_10570	0.13	-1.7
2,256,622	-		PS417_10570	0.13	+0.0
2,256,686	-				+0.4
2,256,724	-		PS417_10570	0.18	-0.2
2,256,724	-		PS417_10570	0.18	-0.4
2,256,729	+		PS417_10570	0.19	-0.1
2,256,729	+		PS417_10570	0.19	+0.2
2,256,729	+		PS417_10570	0.19	-1.8
2,256,729	+		PS417_10570	0.19	+1.0
2,256,730	-		PS417_10570	0.19	+0.5
2,256,730	-		PS417_10570	0.19	+0.1
2,256,730	-		PS417_10570	0.19	+0.1
2,256,784	+		PS417_10570	0.22	+0.0
2,257,030	+		PS417_10570	0.35	-0.4
2,257,031	-		PS417_10570	0.35	+0.2
2,257,205	+		PS417_10570	0.44	-0.0
2,257,350	+		PS417_10570	0.52	-1.1
2,257,351	-		PS417_10570	0.52	-0.0