Strain Fitness in Pseudomonas simiae WCS417 around PS417_10385

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,221,236	-		PS417_10380	0.37	+0.5
2,221,236	-		PS417_10380	0.37	+0.1
2,221,334	+		PS417_10380	0.44	+0.8
2,221,412	+		PS417_10380	0.49	-0.2
2,221,412	+		PS417_10380	0.49	-0.5
2,221,554	+		PS417_10380	0.59	+0.4
2,221,555	-		PS417_10380	0.59	+0.1
2,221,576	-		PS417_10380	0.61	-0.8
2,221,576	-		PS417_10380	0.61	-0.4
2,222,129	-				-2.2
2,222,215	+				+0.3
2,222,216	-				+0.5
2,222,285	+		PS417_10385	0.12	-0.5
2,222,523	+		PS417_10385	0.69	-1.4
2,222,627	+				-0.8
2,222,690	-				+0.1
2,222,690	-				-0.9
2,222,691	+				+0.4
2,222,691	+				-0.7
2,222,691	+				+0.8
2,222,692	-				-2.2
2,222,736	-		PS417_10390	0.13	-0.4
2,222,763	-				-0.6
2,222,908	+		PS417_10390	0.59	-0.6
2,222,909	-		PS417_10390	0.59	+0.4
2,223,192	+				+0.8
2,223,357	+		PS417_10395	0.28	+0.4
2,223,358	-		PS417_10395	0.28	-1.3
2,223,545	+		PS417_10395	0.52	+2.4
2,223,545	+		PS417_10395	0.52	+1.8
2,223,546	-		PS417_10395	0.52	-0.3
2,223,546	-		PS417_10395	0.52	-0.4