Strain Fitness in Pseudomonas simiae WCS417 around PS417_08110

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,772,696	+		PS417_08105	0.42	+2.0
1,772,696	+		PS417_08105	0.42	+0.2
1,772,696	+		PS417_08105	0.42	+0.7
1,772,697	-		PS417_08105	0.42	+0.7
1,772,697	-				-0.9
1,773,073	+		PS417_08105	0.70	+0.5
1,773,073	+		PS417_08105	0.70	+0.2
1,773,073	+		PS417_08105	0.70	+1.0
1,773,073	+		PS417_08105	0.70	-0.4
1,773,073	+		PS417_08105	0.70	-0.0
1,773,073	+		PS417_08105	0.70	-0.1
1,773,073	+				+1.4
1,773,074	-		PS417_08105	0.70	+0.0
1,773,074	-		PS417_08105	0.70	+0.3
1,773,074	-		PS417_08105	0.70	+1.3
1,773,428	+				-1.2
1,773,428	+				-0.2
1,773,428	+				+0.1
1,773,428	+				-0.8
1,773,428	+				-0.7
1,773,429	-				+0.6
1,773,441	+				-1.9
1,773,442	-				-1.7
1,773,442	-				+0.6
1,773,494	-				-0.2
1,773,494	-				+0.8
1,773,495	+				-1.6
1,773,495	+				-0.2
1,773,496	-				+1.1
1,773,512	-				+2.6
1,773,512	-				-0.3
1,773,512	-				-0.6
1,773,542	-				+1.8
1,773,544	-				+0.0
1,773,544	-				+1.1
1,773,696	-		PS417_08110	0.11	-1.6
1,773,843	+		PS417_08110	0.25	+1.7
1,773,843	+		PS417_08110	0.25	+0.4
1,773,844	-		PS417_08110	0.25	+0.6
1,773,844	-		PS417_08110	0.25	+0.7
1,773,844	-		PS417_08110	0.25	+0.4
1,774,027	-		PS417_08110	0.42	-1.4
1,774,164	+		PS417_08110	0.54	-0.6
1,774,164	+		PS417_08110	0.54	+1.6
1,774,164	+				-1.4
1,774,360	-		PS417_08110	0.73	+2.4
1,774,456	+		PS417_08110	0.81	+0.4
1,774,759	+				-0.6
1,774,759	+				-0.1
1,774,761	+				-1.3
1,774,762	-				+1.2
1,774,762	-				-1.5
1,774,762	-				-0.2
1,774,855	+				-0.7
1,774,855	+				+0.3
1,774,855	+				-0.7
1,774,855	+				-0.3
1,774,855	+				+0.3
1,774,967	+				+0.5