Strain Fitness in Pseudomonas simiae WCS417 around PS417_07635

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,679,990	-				-0.3
1,680,147	+		PS417_07630	0.16	-0.5
1,680,393	+		PS417_07630	0.59	-0.7
1,680,393	+		PS417_07630	0.59	-1.2
1,680,393	+		PS417_07630	0.59	-0.2
1,680,394	-		PS417_07630	0.60	-0.2
1,680,394	-		PS417_07630	0.60	-2.4
1,680,394	-		PS417_07630	0.60	-0.5
1,680,424	+		PS417_07630	0.65	+0.0
1,680,427	+		PS417_07630	0.65	-0.2
1,680,428	-		PS417_07630	0.66	+0.5
1,680,452	-		PS417_07630	0.70	-1.8
1,680,452	-		PS417_07630	0.70	-0.3
1,680,452	-		PS417_07630	0.70	-1.7
1,680,678	+				+0.5
1,680,678	+				-0.8
1,680,678	+				-0.2
1,680,678	+				+0.2
1,680,678	+				-0.2
1,680,679	-				+1.2
1,680,682	-				+1.9
1,680,682	-				-0.1
1,680,682	-				-0.7
1,680,729	+				-0.8
1,681,152	+		PS417_07635	0.15	-0.0
1,681,154	+		PS417_07635	0.15	-0.9
1,681,155	-		PS417_07635	0.15	-2.5
1,681,155	-		PS417_07635	0.15	-2.2
1,681,247	-		PS417_07635	0.18	-0.0
1,681,340	+		PS417_07635	0.20	-0.9
1,681,340	+		PS417_07635	0.20	-1.5
1,681,346	+		PS417_07635	0.21	+3.1
1,681,347	-		PS417_07635	0.21	+0.3
1,681,362	+		PS417_07635	0.21	-2.8
1,681,362	+		PS417_07635	0.21	+0.8
1,681,637	+		PS417_07635	0.29	+0.9
1,681,637	+		PS417_07635	0.29	+0.1
1,681,638	-		PS417_07635	0.29	-1.9
1,681,641	-		PS417_07635	0.29	-0.7
1,681,641	-		PS417_07635	0.29	-0.7
1,681,641	-		PS417_07635	0.29	+2.8
1,682,081	+		PS417_07635	0.42	-0.6
1,682,081	+		PS417_07635	0.42	+0.3
1,682,082	-		PS417_07635	0.42	-0.1
1,682,122	+				-1.4
1,682,309	+		PS417_07635	0.49	+1.0
1,682,310	-		PS417_07635	0.49	+0.6
1,682,363	+		PS417_07635	0.50	+1.6
1,682,363	+				+4.6
1,682,364	-		PS417_07635	0.50	-0.2
1,682,364	-		PS417_07635	0.50	-0.7
1,682,364	-		PS417_07635	0.50	-2.2
1,682,364	-		PS417_07635	0.50	+1.4
1,682,364	-		PS417_07635	0.50	-0.9
1,682,515	+				-1.8
1,682,516	-		PS417_07635	0.55	-0.2
1,682,519	+		PS417_07635	0.55	+0.4
1,682,520	-		PS417_07635	0.55	-0.4
1,682,540	+		PS417_07635	0.55	-0.4
1,683,305	+		PS417_07635	0.77	+0.1
1,683,305	+		PS417_07635	0.77	-0.5
1,683,305	+		PS417_07635	0.77	+1.0
1,683,471	+		PS417_07635	0.82	-1.6
1,683,505	-		PS417_07635	0.83	+1.3
1,683,753	+				-1.0
1,683,753	+				-2.6
1,683,754	-				-0.9
1,683,754	-				-0.6
1,683,756	+				+0.2
1,684,120	-				-1.6
1,684,223	+				+0.0
1,684,224	-				-1.4
1,684,224	-				+0.7
1,684,224	-				+1.4
1,684,310	-				+1.2
1,684,397	-				-0.3
1,684,397	-				-0.4
1,684,421	+				-1.5
1,684,557	-				-0.4
1,684,557	-				+0.5
1,685,081	+		PS417_07640	0.45	-0.1