Strain Fitness in Pseudomonas simiae WCS417 around PS417_07175

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,584,185	+		PS417_07170	0.11	-2.1
1,584,288	+		PS417_07170	0.20	-2.5
1,584,545	-		PS417_07170	0.43	-1.9
1,584,599	+		PS417_07170	0.48	+0.1
1,584,615	+		PS417_07170	0.50	-1.8
1,584,781	-		PS417_07170	0.65	-0.9
1,584,908	-		PS417_07170	0.76	-2.4
1,584,908	-		PS417_07170	0.76	-1.4
1,584,937	-		PS417_07170	0.79	-1.6
1,584,940	-		PS417_07170	0.79	-0.2
1,585,072	+				-0.9
1,585,246	+				-0.2
1,585,246	+				-1.8
1,585,246	+				-0.0
1,585,246	+				+0.2
1,585,247	-				-0.3
1,585,408	+		PS417_07175	0.30	-0.2
1,585,408	+		PS417_07175	0.30	-1.9
1,585,549	+		PS417_07175	0.49	-0.8
1,585,549	+		PS417_07175	0.49	-2.1
1,585,549	+				-1.2
1,585,549	+		PS417_07175	0.49	+1.4
1,585,550	-		PS417_07175	0.49	-1.9
1,585,553	+		PS417_07175	0.49	+0.5
1,585,553	+		PS417_07175	0.49	-0.2
1,585,554	-		PS417_07175	0.49	-1.4
1,585,603	+		PS417_07175	0.56	-0.6
1,585,769	-		PS417_07175	0.78	-0.5
1,585,949	-				-1.2
1,586,698	-				+1.0