Strain Fitness in Pseudomonas simiae WCS417 around PS417_06815

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,508,013	-				-0.5
1,508,013	-				+1.3
1,508,085	-				+1.0
1,508,096	-				+1.1
1,508,096	-				-1.7
1,508,189	+		PS417_06810	0.18	-0.5
1,508,189	+		PS417_06810	0.18	-0.7
1,508,190	-		PS417_06810	0.18	-1.7
1,508,190	-		PS417_06810	0.18	-0.8
1,508,292	-		PS417_06810	0.31	+0.5
1,508,372	+		PS417_06810	0.42	-0.0
1,508,373	-		PS417_06810	0.42	+0.4
1,508,373	-		PS417_06810	0.42	-1.0
1,508,639	+		PS417_06810	0.77	+0.4
1,508,639	+				-0.2
1,508,640	-		PS417_06810	0.77	-0.3
1,508,903	+				-1.5
1,508,904	-				+0.2
1,509,211	+		PS417_06815	0.20	+2.1
1,509,212	-		PS417_06815	0.20	-1.2
1,509,431	-		PS417_06815	0.40	+0.3
1,509,607	-		PS417_06815	0.57	+2.3
1,509,613	+		PS417_06815	0.57	+2.3
1,509,613	+		PS417_06815	0.57	-1.0
1,509,613	+		PS417_06815	0.57	-3.6
1,509,614	-		PS417_06815	0.57	-1.3
1,509,614	-		PS417_06815	0.57	+0.2
1,509,614	-		PS417_06815	0.57	+0.2
1,509,615	+		PS417_06815	0.57	-0.1
1,509,615	+		PS417_06815	0.57	+0.8
1,509,615	+		PS417_06815	0.57	-0.2
1,509,615	+		PS417_06815	0.57	-0.8
1,509,616	-		PS417_06815	0.58	+0.1
1,509,616	-		PS417_06815	0.58	-1.6
1,509,616	-		PS417_06815	0.58	-0.7
1,509,616	-		PS417_06815	0.58	+0.5
1,509,616	-		PS417_06815	0.58	+0.0
1,509,616	-		PS417_06815	0.58	-0.7
1,509,616	-		PS417_06815	0.58	-0.4
1,509,715	+		PS417_06815	0.67	-1.5
1,509,832	-		PS417_06815	0.78	+0.0
1,509,835	+		PS417_06815	0.78	+0.6
1,509,992	+				-2.0
1,510,197	+				+0.3
1,510,198	-		PS417_06820	0.41	+0.0
1,510,198	-		PS417_06820	0.41	+0.0
1,510,213	-		PS417_06820	0.46	+0.1
1,510,237	-		PS417_06820	0.54	+1.4
1,510,248	+		PS417_06820	0.57	-0.7
1,510,260	+		PS417_06820	0.61	-0.9
1,510,261	-		PS417_06820	0.61	-1.5
1,510,261	-		PS417_06820	0.61	-0.2
1,510,329	-		PS417_06820	0.83	-0.7
1,510,564	+				+0.6
1,510,564	+				+0.3
1,510,564	+				-0.1
1,510,565	-				+0.2
1,510,565	-				-0.3
1,510,567	+				+0.1
1,510,567	+				+0.5
1,510,568	-				-1.7
1,510,568	-				-0.7
1,510,640	-		PS417_06825	0.25	+1.5
1,510,640	-		PS417_06825	0.25	+0.3
1,510,826	+		PS417_06825	0.89	-1.8
1,510,857	-				+1.3
1,510,857	-				-0.7
1,510,857	-				+0.7
1,510,873	-				+0.9
1,510,924	+				-0.3
1,510,979	-				-0.1
1,510,989	+				-0.9
1,511,025	-				-0.2
1,511,043	+				+1.2