Strain Fitness in Pseudomonas simiae WCS417 around PS417_06505

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,439,755	+				+0.4
1,439,867	+				-0.7
1,439,868	-				+0.2
1,439,868	-				+0.0
1,439,875	+				-1.0
1,439,875	+				-0.1
1,439,875	+				-0.9
1,439,875	+				+0.3
1,439,876	-				-0.0
1,439,876	-				-0.3
1,439,876	-				+0.7
1,439,876	-				+1.2
1,440,279	+		PS417_06500	0.55	-2.5
1,440,526	-		PS417_06500	0.87	-1.5
1,440,741	+				+0.2
1,440,741	+				+0.9
1,440,741	+				-1.1
1,440,741	+				-0.1
1,440,743	+				+0.0
1,440,927	+		PS417_06505	0.40	+1.2
1,440,927	+		PS417_06505	0.40	+0.3
1,440,928	-		PS417_06505	0.40	-0.2
1,440,951	+		PS417_06505	0.45	+2.0
1,441,170	-				-1.7
1,441,170	-				+3.9
1,441,170	-				-0.2
1,441,170	-				-0.5
1,441,182	+				+0.3
1,441,182	+				-1.0
1,441,182	+				-2.0
1,441,182	+				-0.2
1,441,300	-				+0.5
1,441,518	-				-1.0
1,441,682	+		PS417_06510	0.18	-0.8
1,441,682	+		PS417_06510	0.18	+0.3
1,441,683	-		PS417_06510	0.18	-0.4
1,441,683	-		PS417_06510	0.18	+0.4
1,441,708	-		PS417_06510	0.19	+0.5
1,441,959	-		PS417_06510	0.31	-1.8
1,441,959	-		PS417_06510	0.31	-0.7
1,442,050	-		PS417_06510	0.35	-0.2
1,442,075	+		PS417_06510	0.36	-0.2
1,442,075	+		PS417_06510	0.36	-1.2
1,442,075	+		PS417_06510	0.36	+0.4
1,442,076	-		PS417_06510	0.36	-1.6
1,442,076	-		PS417_06510	0.36	-1.1