Strain Fitness in Pseudomonas simiae WCS417 around PS417_06475

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,436,166	+		PS417_06470	0.39	-2.7
1,436,167	-		PS417_06470	0.39	+1.0
1,436,167	-		PS417_06470	0.39	-1.2
1,436,181	+		PS417_06470	0.40	-0.2
1,436,182	-		PS417_06470	0.40	+0.3
1,436,182	-		PS417_06470	0.40	-0.4
1,436,200	+		PS417_06470	0.41	-1.4
1,436,778	-		PS417_06470	0.83	-0.1
1,437,027	+				-1.1
1,437,027	+				-0.9
1,437,028	-				-0.3
1,437,408	-		PS417_06480	0.14	-0.1
1,437,418	+		PS417_06480	0.16	+0.1
1,437,419	-		PS417_06480	0.16	+1.3
1,437,540	+		PS417_06480	0.41	-0.2
1,437,541	-		PS417_06480	0.42	+0.1
1,437,671	+		PS417_06480	0.69	-0.7
1,437,809	+				+1.1
1,437,809	+				-0.9
1,437,850	+				-0.4
1,437,851	-				+0.2
1,437,943	+		PS417_06485	0.21	+1.0
1,437,944	-		PS417_06485	0.21	-1.2
1,437,963	+		PS417_06485	0.25	-0.1
1,437,963	+		PS417_06485	0.25	-0.3
1,437,989	+		PS417_06485	0.31	-0.4
1,437,990	-		PS417_06485	0.31	+0.3
1,437,990	-				+1.4
1,437,990	-				+0.4
1,438,192	+		PS417_06485	0.74	+0.7
1,438,199	+		PS417_06485	0.76	-0.6
1,438,200	-		PS417_06485	0.76	+1.3
1,438,200	-		PS417_06485	0.76	+0.6
1,438,200	-		PS417_06485	0.76	-0.2
1,438,252	+		PS417_06485	0.87	+0.3
1,438,307	+				-3.3
1,438,308	-				+0.3
1,438,329	-				-0.1