Strain Fitness in Pseudomonas simiae WCS417 around PS417_06470

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,434,743	-				-1.5
1,434,772	+				+0.3
1,434,772	+				+0.7
1,434,772	+				+1.4
1,434,773	-				-3.0
1,434,773	-				+0.0
1,434,824	+				-1.1
1,434,835	-				-1.8
1,434,848	-				-0.5
1,435,219	+		PS417_06465	0.42	+0.0
1,435,220	-		PS417_06465	0.42	-0.3
1,435,370	+		PS417_06465	0.63	-2.3
1,435,370	+		PS417_06465	0.63	-2.2
1,435,883	+		PS417_06470	0.19	-1.1
1,435,887	-		PS417_06470	0.19	+0.8
1,435,943	-		PS417_06470	0.23	+0.6
1,435,963	-		PS417_06470	0.24	-0.0
1,436,166	+		PS417_06470	0.39	-2.7
1,436,167	-		PS417_06470	0.39	+1.0
1,436,167	-		PS417_06470	0.39	-1.2
1,436,181	+		PS417_06470	0.40	-0.2
1,436,182	-		PS417_06470	0.40	+0.3
1,436,182	-		PS417_06470	0.40	-0.4
1,436,200	+		PS417_06470	0.41	-1.4
1,436,778	-		PS417_06470	0.83	-0.1
1,437,027	+				-1.1
1,437,027	+				-0.9
1,437,028	-				-0.3
1,437,408	-		PS417_06480	0.14	-0.1
1,437,418	+		PS417_06480	0.16	+0.1
1,437,419	-		PS417_06480	0.16	+1.3
1,437,540	+		PS417_06480	0.41	-0.2
1,437,541	-		PS417_06480	0.42	+0.1
1,437,671	+		PS417_06480	0.69	-0.7
1,437,809	+				+1.1
1,437,809	+				-0.9
1,437,850	+				-0.4
1,437,851	-				+0.2
1,437,943	+		PS417_06485	0.21	+1.0
1,437,944	-		PS417_06485	0.21	-1.2
1,437,963	+		PS417_06485	0.25	-0.1
1,437,963	+		PS417_06485	0.25	-0.3
1,437,989	+		PS417_06485	0.31	-0.4
1,437,990	-		PS417_06485	0.31	+0.3
1,437,990	-				+1.4
1,437,990	-				+0.4