Strain Fitness in Pseudomonas simiae WCS417 around PS417_05045

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,121,282	+		PS417_05040	0.19	+1.2
1,121,282	+		PS417_05040	0.19	-3.6
1,121,282	+		PS417_05040	0.19	-1.1
1,121,282	+		PS417_05040	0.19	-0.3
1,121,411	+				+1.0
1,121,412	-		PS417_05040	0.32	-0.2
1,121,949	-		PS417_05040	0.84	-1.1
1,122,110	+				+0.1
1,122,110	+				-0.1
1,122,111	-				-0.9
1,122,111	-				-0.1
1,122,128	+				-0.3
1,122,348	+		PS417_05045	0.18	-1.0
1,122,368	-		PS417_05045	0.19	-0.5
1,122,533	-		PS417_05045	0.32	-0.8
1,122,593	+		PS417_05045	0.36	-0.6
1,122,594	-		PS417_05045	0.36	-3.4
1,122,734	+		PS417_05045	0.47	+1.5
1,122,983	+		PS417_05045	0.66	+1.7
1,122,984	-		PS417_05045	0.66	-0.3
1,123,318	-				-0.3
1,123,383	-				-2.0
1,123,443	+				+0.7
1,123,471	-				-1.7
1,123,471	-				+0.8
1,123,471	-				+1.2
1,123,471	-				-0.3
1,123,501	+				-2.7
1,123,525	+				-1.0
1,123,547	-				+0.4
1,123,547	-				-1.0
1,123,556	+				-0.3
1,123,556	+				-1.1
1,123,556	+				+1.7
1,123,557	-				+0.1
1,123,557	-				+0.2
1,123,557	-				+0.3
1,123,560	+				-3.5
1,123,560	+				-0.7
1,123,561	-				+1.7
1,123,561	-				+1.1
1,123,583	+				-0.8
1,123,583	+				-1.1
1,123,584	-				-1.3
1,123,601	+				-0.4
1,123,601	+				-0.7
1,123,668	+				+0.0
1,123,668	+				-0.1
1,123,669	-				+2.2
1,123,740	-				+0.2
1,123,980	-		PS417_05050	0.43	-0.1
1,124,090	+		PS417_05050	0.58	-2.2
1,124,240	+		PS417_05050	0.79	+0.6
1,124,241	-		PS417_05050	0.80	-1.6
1,124,241	-		PS417_05050	0.80	-2.0
1,124,312	+		PS417_05050	0.89	+0.3
1,124,385	-				+0.7
1,124,395	+				-1.2
1,124,396	-				+1.3
1,124,406	-				-0.7