Strain Fitness in Pseudomonas simiae WCS417 around PS417_04475

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
990,370	+				-1.3
990,408	-				-0.9
990,523	+				-0.3
990,524	-				+0.5
990,538	-				+0.7
990,538	-				-0.6
990,716	+				-0.7
990,804	-				-0.6
990,852	+				+0.9
990,854	+				-0.3
990,855	-				-0.6
990,855	-				+0.4
990,855	-				+0.5
990,871	+				-1.2
990,912	+				-3.0
991,188	-				-0.3
991,188	-				+0.2
991,232	+				-0.1
991,232	+				-2.2
991,233	-				+0.2
991,233	-				+0.8
991,233	-				+0.7
991,233	-				-1.1
991,233	-				-0.3
991,311	+				+1.2
991,589	+		PS417_04475	0.40	+0.1
991,589	+		PS417_04475	0.40	-1.4
991,590	-		PS417_04475	0.40	-4.6
991,702	+		PS417_04475	0.59	-2.5
991,703	-		PS417_04475	0.59	-1.9
991,726	+		PS417_04475	0.63	-2.2
991,726	+		PS417_04475	0.63	-2.4
991,726	+		PS417_04475	0.63	-1.7
991,727	-		PS417_04475	0.63	-0.9
992,096	+		PS417_04480	0.46	-1.0
992,178	-		PS417_04480	0.85	-1.4
992,219	+				+0.8
992,249	+				-0.7
992,278	+				+2.1
992,286	-				-1.5
992,286	-				-1.3
992,291	-				+1.0
992,316	+				+0.1
992,335	-				-0.9
992,377	+				-1.7
992,378	-				-1.6
992,429	-		PS417_04485	0.15	-0.6
992,429	-		PS417_04485	0.15	+0.8
992,431	+		PS417_04485	0.16	-0.2
992,431	+		PS417_04485	0.16	+0.1
992,432	-		PS417_04485	0.16	+1.7
992,432	-		PS417_04485	0.16	-1.4
992,432	-		PS417_04485	0.16	-1.1
992,554	+		PS417_04485	0.63	+0.1
992,555	-		PS417_04485	0.64	-1.6
992,555	-		PS417_04485	0.64	+0.1
992,726	+				-0.1
992,727	-				+0.2
992,800	+				-1.2