Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_04015 and PS417_04020 are separated by 11 nucleotides PS417_04020 and PS417_04025 are separated by 20 nucleotides PS417_04025 and PS417_04030 are separated by 330 nucleotides
PS417_04015: PS417_04015 - choline ABC transporter permease, at 902,148 to 902,801
_04015
PS417_04020: PS417_04020 - glycine/betaine ABC transporter substrate-binding protein, at 902,813 to 903,709
_04020
PS417_04025: PS417_04025 - glycine/betaine ABC transporter permease, at 903,730 to 904,446
_04025
PS417_04030: PS417_04030 - peptide chain release factor 3, at 904,777 to 906,360
_04030
Position (kb) 903
904
905 Strain fitness (log2 ratio) -2
-1
0
1 at 902.814 kb on + strand at 903.015 kb on + strand, within PS417_04020 at 903.015 kb on + strand, within PS417_04020 at 903.016 kb on - strand, within PS417_04020 at 903.075 kb on + strand, within PS417_04020 at 903.076 kb on - strand, within PS417_04020 at 903.171 kb on + strand, within PS417_04020 at 903.171 kb on + strand, within PS417_04020 at 903.171 kb on + strand, within PS417_04020 at 903.172 kb on - strand, within PS417_04020 at 903.172 kb on - strand, within PS417_04020 at 903.336 kb on + strand, within PS417_04020 at 903.336 kb on + strand, within PS417_04020 at 903.337 kb on - strand, within PS417_04020 at 903.408 kb on + strand, within PS417_04020 at 903.448 kb on - strand, within PS417_04020 at 903.574 kb on - strand, within PS417_04020 at 903.731 kb on + strand at 904.015 kb on - strand, within PS417_04025 at 904.015 kb on - strand, within PS417_04025 at 904.070 kb on + strand, within PS417_04025 at 904.070 kb on + strand, within PS417_04025 at 904.071 kb on - strand, within PS417_04025 at 904.075 kb on - strand at 904.075 kb on - strand, within PS417_04025 at 904.325 kb on + strand, within PS417_04025 at 904.326 kb on - strand, within PS417_04025 at 904.593 kb on + strand at 904.606 kb on + strand at 904.651 kb on + strand at 904.658 kb on + strand at 904.658 kb on + strand at 904.684 kb on + strand at 904.735 kb on + strand at 904.735 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Polymyxin B sulfate 0.003 mg/ml remove 902,814 + -0.4 903,015 + PS417_04020 0.23 -1.6 903,015 + PS417_04020 0.23 -2.3 903,016 - PS417_04020 0.23 +0.0 903,075 + PS417_04020 0.29 -0.9 903,076 - PS417_04020 0.29 -0.2 903,171 + PS417_04020 0.40 -0.0 903,171 + PS417_04020 0.40 -1.4 903,171 + PS417_04020 0.40 -1.1 903,172 - PS417_04020 0.40 +0.6 903,172 - PS417_04020 0.40 -0.5 903,336 + PS417_04020 0.58 +0.1 903,336 + PS417_04020 0.58 -0.7 903,337 - PS417_04020 0.58 +0.1 903,408 + PS417_04020 0.66 +0.2 903,448 - PS417_04020 0.71 -0.2 903,574 - PS417_04020 0.85 -0.8 903,731 + -0.3 904,015 - PS417_04025 0.40 -1.2 904,015 - PS417_04025 0.40 -0.6 904,070 + PS417_04025 0.47 -1.7 904,070 + PS417_04025 0.47 -0.5 904,071 - PS417_04025 0.48 -0.5 904,075 - -0.6 904,075 - PS417_04025 0.48 -1.4 904,325 + PS417_04025 0.83 -1.3 904,326 - PS417_04025 0.83 -0.5 904,593 + -0.4 904,606 + -0.3 904,651 + -0.1 904,658 + -1.0 904,658 + -0.1 904,684 + -0.1 904,735 + -1.6 904,735 + -0.3
Or see this region's nucleotide sequence