Strain Fitness in Pseudomonas simiae WCS417 around PS417_02950
Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Polymyxin B sulfate 0.003 mg/ml |
---|---|---|---|---|---|
remove | |||||
674,441 | - | PS417_02950 | 0.18 | -1.1 | |
674,441 | - | PS417_02950 | 0.18 | -2.1 | |
674,460 | - | PS417_02950 | 0.19 | -2.0 | |
675,161 | - | PS417_02950 | 0.89 | -2.8 | |
675,185 | - | -1.4 | |||
675,245 | - | +0.2 | |||
675,250 | - | -0.6 | |||
675,250 | - | -0.7 | |||
675,250 | - | -0.6 | |||
675,250 | - | +1.3 | |||
675,250 | - | -3.7 | |||
675,250 | - | -0.5 | |||
675,250 | - | -0.5 | |||
675,277 | - | +0.8 | |||
675,277 | - | -0.9 | |||
675,307 | - | -0.1 | |||
675,491 | - | -0.3 | |||
675,503 | + | -1.7 | |||
675,533 | + | -0.5 | |||
675,534 | - | -0.3 | |||
675,691 | + | PS417_02955 | 0.19 | -0.8 | |
675,691 | + | PS417_02955 | 0.19 | -0.6 | |
675,691 | + | PS417_02955 | 0.19 | -0.3 | |
675,692 | - | PS417_02955 | 0.19 | +0.5 | |
675,692 | - | PS417_02955 | 0.19 | -0.3 | |
675,877 | + | PS417_02955 | 0.34 | +0.9 | |
675,878 | - | PS417_02955 | 0.34 | -1.3 |
Or see this region's nucleotide sequence