Strain Fitness in Pseudomonas simiae WCS417 around PS417_27120

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,853,116	+		PS417_27115	0.26	-0.0
5,853,117	-		PS417_27115	0.26	-2.5
5,853,117	-		PS417_27115	0.26	+0.1
5,853,117	-		PS417_27115	0.26	-2.2
5,853,117	-		PS417_27115	0.26	-0.2
5,853,242	+		PS417_27115	0.37	-0.2
5,853,639	+		PS417_27115	0.72	-0.5
5,853,639	+		PS417_27115	0.72	-0.6
5,853,639	+		PS417_27115	0.72	-2.0
5,853,639	+		PS417_27115	0.72	-0.0
5,853,726	-		PS417_27115	0.79	-2.0
5,853,939	+				+0.0
5,853,941	+				-1.7
5,853,966	-				+0.9
5,854,031	+				-0.6
5,854,032	-				+0.7
5,854,032	-				+0.7
5,854,032	-				+1.3
5,854,211	+		PS417_27120	0.17	-2.0
5,854,212	-		PS417_27120	0.17	-2.3
5,854,250	+		PS417_27120	0.20	-0.9
5,854,250	+		PS417_27120	0.20	-0.6
5,854,347	-		PS417_27120	0.29	+0.2
5,854,457	+		PS417_27120	0.39	-0.3
5,854,457	+		PS417_27120	0.39	-2.7
5,854,475	+		PS417_27120	0.41	+0.9
5,854,476	-		PS417_27120	0.41	+0.1
5,854,476	-		PS417_27120	0.41	-0.4
5,854,539	+		PS417_27120	0.46	-1.8
5,854,540	-		PS417_27120	0.47	-1.7
5,854,562	+		PS417_27120	0.49	-1.2
5,854,562	+		PS417_27120	0.49	-0.6
5,854,563	-		PS417_27120	0.49	+0.6
5,854,563	-		PS417_27120	0.49	+0.8
5,854,739	+		PS417_27120	0.65	-2.4
5,854,752	-		PS417_27120	0.66	+1.2
5,854,961	+		PS417_27120	0.85	-1.8
5,855,034	-				+0.2
5,855,037	+				+1.2
5,855,037	+				-2.9
5,855,037	+				-1.4
5,855,038	-				-0.7
5,855,038	-				+1.1
5,855,038	-				+0.8
5,855,038	-				-1.2
5,855,138	+				-0.8
5,855,139	-				-0.9
5,855,142	+				+0.9
5,855,142	+				-0.8
5,855,189	+				-0.9
5,855,229	-				-1.4
5,855,355	-				-2.5
5,855,384	+				-1.3
5,855,384	+				-1.6
5,855,498	+		PS417_27125	0.20	-1.0
5,855,498	+		PS417_27125	0.20	+0.2
5,855,498	+		PS417_27125	0.20	-0.4
5,855,499	-		PS417_27125	0.20	-3.0
5,855,499	-		PS417_27125	0.20	-1.4
5,855,499	-		PS417_27125	0.20	-0.8
5,855,513	+		PS417_27125	0.21	+0.8
5,855,514	-		PS417_27125	0.22	-2.8
5,855,514	-		PS417_27125	0.22	-1.0
5,855,680	-		PS417_27125	0.37	-0.0
5,855,680	-		PS417_27125	0.37	+0.5
5,855,705	+		PS417_27125	0.39	-1.1
5,855,705	+		PS417_27125	0.39	+0.8
5,855,705	+		PS417_27125	0.39	-1.8
5,855,706	-		PS417_27125	0.39	-1.3
5,855,706	-		PS417_27125	0.39	-1.5
5,855,811	-		PS417_27125	0.49	-0.3
5,855,811	-		PS417_27125	0.49	-2.2
5,855,811	-		PS417_27125	0.49	-1.8
5,855,988	-		PS417_27125	0.65	-2.9
5,855,988	-		PS417_27125	0.65	-0.9
5,855,988	-		PS417_27125	0.65	+1.0
5,855,988	-				-0.8
5,856,060	-		PS417_27125	0.71	-3.0
5,856,092	+		PS417_27125	0.74	-2.4