Strain Fitness in Pseudomonas simiae WCS417 around PS417_26330

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,689,824	+		PS417_26325	0.63	-1.6
5,689,825	-		PS417_26325	0.63	+0.2
5,689,866	+		PS417_26325	0.67	+0.3
5,689,866	+		PS417_26325	0.67	-0.2
5,689,866	+		PS417_26325	0.67	-0.1
5,689,866	+		PS417_26325	0.67	+3.0
5,689,866	+		PS417_26325	0.67	+2.1
5,689,866	+		PS417_26325	0.67	+0.4
5,689,866	+		PS417_26325	0.67	-0.8
5,689,866	+		PS417_26325	0.67	+0.1
5,689,867	-		PS417_26325	0.67	-0.1
5,689,875	-		PS417_26325	0.67	+0.1
5,689,889	+		PS417_26325	0.69	+2.3
5,690,227	-				+0.1
5,690,227	-				+1.5
5,690,280	+				+1.2
5,690,280	+				-0.8
5,690,280	+				-1.1
5,690,281	-				-0.4
5,690,326	+				+0.8
5,690,326	+				-0.1
5,690,327	-				+3.9
5,690,386	+				-0.6
5,690,386	+				+1.3
5,690,387	-				-0.7
5,690,445	+				-0.3
5,690,446	-				+0.5
5,690,452	+				+0.7
5,690,453	-				-0.5
5,690,454	+				-1.3
5,690,454	+				-1.1
5,690,454	+				+1.1
5,690,454	+				+1.0
5,690,454	+				-0.7
5,690,455	-				+0.1
5,690,455	-				-0.5
5,690,566	-				+2.0
5,690,580	+				+0.2
5,690,581	-				+0.0
5,690,935	+		PS417_26330	0.24	+0.2
5,690,936	-		PS417_26330	0.25	-1.6
5,691,222	+		PS417_26330	0.39	-0.1
5,691,222	+		PS417_26330	0.39	-0.7
5,691,223	-		PS417_26330	0.39	+3.2
5,691,223	-		PS417_26330	0.39	-1.2
5,691,394	+		PS417_26330	0.48	-2.2
5,691,507	+		PS417_26330	0.53	-0.6
5,691,507	+		PS417_26330	0.53	+0.5
5,691,508	-		PS417_26330	0.53	+0.2
5,691,544	-		PS417_26330	0.55	+2.1
5,691,942	+		PS417_26330	0.75	+0.3
5,691,969	+		PS417_26330	0.76	+0.2
5,691,969	+		PS417_26330	0.76	+0.6
5,692,068	+		PS417_26330	0.81	-0.8
5,692,069	-		PS417_26330	0.81	+2.2
5,692,069	-		PS417_26330	0.81	+0.8
5,692,099	-		PS417_26330	0.83	+0.2
5,692,099	-		PS417_26330	0.83	+0.3
5,692,237	-		PS417_26330	0.90	+0.1
5,692,237	-		PS417_26330	0.90	-0.2
5,692,257	+				+0.2
5,692,257	+				-0.7
5,692,257	+				+0.2
5,692,257	+				+0.7
5,692,258	-				-1.7
5,692,258	-				-0.5
5,692,261	-				+1.2
5,692,374	+				+0.5
5,692,375	-				-1.9
5,692,375	-				-1.6
5,692,375	-				+0.1
5,692,419	-				+1.2
5,692,419	-				-0.3
5,692,419	-				+0.5
5,692,420	+				+0.8
5,692,420	+				+0.9
5,692,421	-				-0.2
5,692,421	-				+1.4
5,692,531	-				-0.7
5,692,711	-				-2.0
5,692,770	+				-0.6
5,692,770	+				-1.2
5,692,770	+				-1.0
5,692,770	+				-0.5
5,692,771	-				-3.6
5,692,771	-				-1.7
5,692,787	+				-1.6
5,692,918	-		PS417_26335	0.24	-3.9
5,692,959	+		PS417_26335	0.31	-0.2
5,693,172	+		PS417_26335	0.67	-0.7
5,693,173	-		PS417_26335	0.67	+2.8
5,693,331	+				-2.9
5,693,331	+				-1.7
5,693,331	+				-1.8
5,693,332	-				-1.8
5,693,332	-				-3.8
5,693,365	-				-1.6
5,693,373	+				-0.3
5,693,373	+				+1.1
5,693,373	+				+0.7
5,693,374	-				-1.1
5,693,374	-				-1.0
5,693,374	-				-0.6
5,693,374	-				-1.4
5,693,374	-				-1.6
5,693,374	-				-0.2
5,693,376	-				-0.7