Strain Fitness in Pseudomonas simiae WCS417 around PS417_24385

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,292,481	+		PS417_24380	0.66	-0.1
5,292,482	-		PS417_24380	0.66	-0.2
5,292,530	+		PS417_24380	0.70	+1.1
5,292,531	-		PS417_24380	0.70	-1.5
5,292,971	+				+0.0
5,292,971	+				-2.6
5,293,393	+		PS417_24385	0.44	-1.3
5,293,394	-		PS417_24385	0.44	-0.8
5,293,504	+		PS417_24385	0.54	-1.1
5,293,807	-		PS417_24385	0.82	-0.2
5,293,807	-		PS417_24385	0.82	-1.6
5,293,855	+		PS417_24385	0.87	-0.6
5,293,855	+		PS417_24385	0.87	-0.6
5,293,855	+		PS417_24385	0.87	-1.0
5,293,856	-		PS417_24385	0.87	+0.4
5,293,856	-		PS417_24385	0.87	-2.7
5,293,962	+				+0.8
5,294,094	+				-0.7
5,294,095	-				-3.0
5,294,160	+				+0.2
5,294,161	-				+0.2
5,294,187	+				-1.4
5,294,187	+				-1.3
5,294,187	+				-0.7
5,294,188	-				-0.7
5,294,334	+		PS417_24390	0.18	+1.0
5,294,334	+		PS417_24390	0.18	-1.7
5,294,334	+		PS417_24390	0.18	-0.1
5,294,424	+		PS417_24390	0.25	-1.3
5,294,424	+		PS417_24390	0.25	-0.8
5,294,519	-		PS417_24390	0.32	+0.9
5,294,541	+		PS417_24390	0.34	+0.1
5,294,541	+		PS417_24390	0.34	-0.2
5,294,542	-		PS417_24390	0.34	-0.6
5,294,542	-				-0.3
5,294,584	-		PS417_24390	0.37	-0.2
5,294,632	-		PS417_24390	0.41	-2.3
5,294,732	+		PS417_24390	0.49	+0.8
5,294,732	+		PS417_24390	0.49	-0.5
5,294,912	+		PS417_24390	0.62	+0.4