Strain Fitness in Pseudomonas simiae WCS417 around PS417_24230

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,254,203	+		PS417_24220	0.79	-1.7
5,254,203	+		PS417_24220	0.79	-0.1
5,254,203	+		PS417_24220	0.79	+0.7
5,254,203	+		PS417_24220	0.79	+0.0
5,254,203	+		PS417_24220	0.79	+0.2
5,254,203	+		PS417_24220	0.79	-0.1
5,254,203	+		PS417_24220	0.79	+0.4
5,254,203	+		PS417_24220	0.79	+0.7
5,254,204	-		PS417_24220	0.79	-1.1
5,254,380	+		PS417_24220	0.89	+0.7
5,254,380	+		PS417_24220	0.89	+0.3
5,254,404	+				+2.6
5,254,404	+				+0.8
5,254,404	+				+0.3
5,254,404	+				-0.1
5,254,405	-				+0.1
5,254,405	-				-0.3
5,254,446	+				+0.6
5,254,473	+				+1.6
5,254,474	-				-1.1
5,254,474	-				+0.4
5,254,474	-				-0.4
5,254,474	-				-0.1
5,254,479	+				+0.6
5,254,480	-				-0.3
5,254,663	+		PS417_24225	0.27	-1.5
5,254,664	-		PS417_24225	0.27	+0.2
5,255,279	+				-0.6
5,255,279	+				-2.8
5,255,279	+				-0.8
5,255,571	-		PS417_24230	0.21	-1.7
5,255,625	-		PS417_24230	0.23	+1.3
5,255,625	-		PS417_24230	0.23	-2.1
5,256,044	+		PS417_24230	0.40	-1.3
5,256,224	+		PS417_24230	0.47	+0.2
5,256,228	-		PS417_24230	0.48	-0.5
5,256,363	+		PS417_24230	0.53	-2.6
5,256,474	-		PS417_24230	0.58	-2.1
5,256,524	+		PS417_24230	0.60	-2.0
5,256,678	-		PS417_24230	0.66	-2.5
5,256,698	+		PS417_24230	0.67	-1.3
5,256,726	-		PS417_24230	0.68	-2.3
5,257,223	+		PS417_24230	0.88	-1.3
5,257,224	-		PS417_24230	0.88	+1.2
5,257,224	-		PS417_24230	0.88	-1.4
5,257,224	-		PS417_24230	0.88	+1.7
5,257,224	-		PS417_24230	0.88	-1.3
5,257,224	-		PS417_24230	0.88	-0.2
5,257,517	+				+1.3
5,257,518	-				+0.9
5,257,518	-				-0.6
5,257,673	+				+1.7
5,257,674	-				-0.3
5,257,699	+				+0.9
5,257,699	+				-2.3
5,257,700	-				-1.0
5,257,700	-				+0.2
5,257,703	-				+0.2
5,257,703	-				-0.6
5,257,774	-				-2.2
5,257,926	+		PS417_24235	0.31	-0.7
5,257,927	-		PS417_24235	0.31	-2.5
5,257,997	-		PS417_24235	0.46	-3.3
5,258,087	-		PS417_24235	0.64	-0.1
5,258,087	-		PS417_24235	0.64	+0.6
5,258,260	+				-1.5
5,258,261	-				+0.4
5,258,331	+				+0.3
5,258,342	+				+0.2
5,258,343	-				-0.3
5,258,354	-				+0.2