Strain Fitness in Pseudomonas simiae WCS417 around PS417_23625

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,108,749	+				+0.2
5,108,750	-				-1.3
5,108,750	-				+0.2
5,108,820	+		PS417_23620	0.12	+0.1
5,108,821	-		PS417_23620	0.12	-0.4
5,108,821	-		PS417_23620	0.12	+0.8
5,108,821	-		PS417_23620	0.12	-1.8
5,108,821	-		PS417_23620	0.12	+1.4
5,108,991	+		PS417_23620	0.31	-0.8
5,108,992	-		PS417_23620	0.31	-0.2
5,109,258	+		PS417_23620	0.61	-0.2
5,109,259	-		PS417_23620	0.61	+0.8
5,109,259	-				-0.2
5,109,591	-				-3.5
5,109,596	+				+0.3
5,109,597	-				-0.2
5,109,642	-				+0.4
5,109,665	+				+0.4
5,109,665	+				+2.8
5,109,666	-				-1.1
5,109,884	+		PS417_23625	0.20	-1.9
5,109,900	-		PS417_23625	0.21	-2.9
5,109,900	-		PS417_23625	0.21	-0.8
5,110,122	-		PS417_23625	0.46	+0.2
5,110,274	-		PS417_23625	0.63	-0.3
5,110,581	+				-0.6
5,110,581	+				-0.9
5,110,582	-				+0.9
5,110,636	+				+0.6
5,110,636	+				+0.3
5,110,783	+		PS417_23630	0.25	-3.0
5,110,783	+		PS417_23630	0.25	-1.3
5,110,783	+		PS417_23630	0.25	-0.4
5,110,870	+		PS417_23630	0.40	+1.8
5,110,870	+		PS417_23630	0.40	+0.1
5,110,870	+		PS417_23630	0.40	-0.2
5,110,870	+		PS417_23630	0.40	-1.2
5,110,870	+		PS417_23630	0.40	-1.8
5,110,871	-		PS417_23630	0.40	+0.0
5,110,871	-		PS417_23630	0.40	-1.2
5,110,903	+		PS417_23630	0.45	+0.2
5,110,903	+		PS417_23630	0.45	-2.1
5,110,984	+		PS417_23630	0.59	-0.2
5,111,032	+		PS417_23630	0.67	-1.2
5,111,032	+		PS417_23630	0.67	-0.2
5,111,033	-		PS417_23630	0.67	-0.5
5,111,083	+		PS417_23630	0.76	+0.5
5,111,167	+				-0.3
5,111,309	+				-2.2