Strain Fitness in Pseudomonas simiae WCS417 around PS417_22250

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,821,441	+		PS417_22245	0.26	+0.2
4,821,442	-		PS417_22245	0.26	-1.4
4,821,539	-		PS417_22245	0.36	+1.0
4,821,547	+		PS417_22245	0.37	+0.6
4,821,553	+		PS417_22245	0.38	+0.0
4,821,553	+		PS417_22245	0.38	+0.8
4,821,554	-		PS417_22245	0.38	+0.2
4,821,554	-		PS417_22245	0.38	+0.4
4,821,823	+		PS417_22245	0.66	-0.7
4,821,824	-		PS417_22245	0.66	+1.7
4,821,922	+		PS417_22245	0.76	-1.3
4,821,923	-		PS417_22245	0.76	-1.3
4,821,997	+		PS417_22245	0.84	+0.4
4,821,998	-		PS417_22245	0.84	-0.2
4,821,998	-		PS417_22245	0.84	-0.0
4,822,151	-				+0.3
4,822,151	-				+0.4
4,822,181	-				-1.1
4,822,223	+				-1.0
4,822,528	+		PS417_22250	0.15	-1.4
4,822,636	+		PS417_22250	0.24	+0.7
4,822,637	-		PS417_22250	0.24	-1.0
4,823,631	-				+0.9
4,823,656	-				+0.7
4,823,897	-				+1.1
4,823,919	-				+0.9
4,823,919	-				+0.1
4,824,139	+		PS417_22260	0.20	-1.8
4,824,140	-		PS417_22260	0.20	+0.5