Strain Fitness in Pseudomonas simiae WCS417 around PS417_22235

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,817,922	-		PS417_22225	0.60	-1.3
4,817,922	-		PS417_22225	0.60	+1.7
4,817,922	-		PS417_22225	0.60	+0.1
4,818,353	+				+2.0
4,818,353	+				+1.6
4,818,655	-		PS417_22230	0.62	-0.5
4,818,655	-		PS417_22230	0.62	-0.1
4,818,656	+		PS417_22230	0.63	-0.4
4,818,656	+		PS417_22230	0.63	-0.7
4,818,657	-		PS417_22230	0.63	-0.4
4,818,657	-		PS417_22230	0.63	+0.3
4,818,657	-		PS417_22230	0.63	+0.8
4,818,810	+				+0.3
4,818,865	+				-0.7
4,818,966	+				-1.2
4,819,097	+		PS417_22235	0.12	+0.6
4,819,097	+		PS417_22235	0.12	+0.4
4,819,097	+		PS417_22235	0.12	+1.2
4,819,098	-		PS417_22235	0.12	+0.2
4,819,098	-		PS417_22235	0.12	+0.2
4,819,098	-		PS417_22235	0.12	-0.2
4,819,098	-		PS417_22235	0.12	-2.2
4,819,098	-		PS417_22235	0.12	+0.7
4,819,098	-		PS417_22235	0.12	-0.1
4,819,098	-		PS417_22235	0.12	+1.7
4,819,098	-		PS417_22235	0.12	+1.4
4,819,205	-		PS417_22235	0.20	-0.4
4,819,262	+		PS417_22235	0.24	-1.2
4,819,262	+		PS417_22235	0.24	-1.0
4,819,262	+		PS417_22235	0.24	+0.9
4,819,403	+		PS417_22235	0.34	+0.0
4,819,403	+		PS417_22235	0.34	+0.5
4,819,403	+		PS417_22235	0.34	+0.9
4,819,404	-		PS417_22235	0.34	+0.9
4,819,418	+		PS417_22235	0.35	+1.3
4,819,418	+		PS417_22235	0.35	+1.4
4,819,418	+		PS417_22235	0.35	+1.1
4,819,419	-		PS417_22235	0.35	-2.0
4,819,419	-		PS417_22235	0.35	-0.4
4,819,518	-		PS417_22235	0.42	+0.1
4,819,518	-		PS417_22235	0.42	-0.5
4,819,599	-		PS417_22235	0.48	+1.1
4,819,617	-		PS417_22235	0.49	-0.2
4,819,617	-		PS417_22235	0.49	+1.0
4,819,617	-		PS417_22235	0.49	-0.1
4,819,985	+		PS417_22235	0.75	+0.7
4,819,986	-		PS417_22235	0.75	+0.2
4,819,995	-		PS417_22235	0.75	+0.4
4,819,995	-		PS417_22235	0.75	-0.7
4,819,995	-		PS417_22235	0.75	+2.0
4,820,036	+		PS417_22235	0.78	-3.0
4,820,087	+		PS417_22235	0.82	-0.0
4,820,087	+		PS417_22235	0.82	+0.8
4,820,088	-		PS417_22235	0.82	-0.4
4,820,088	-		PS417_22235	0.82	+0.6
4,820,220	+				+0.1
4,820,220	+				+1.5
4,820,286	+				+1.0
4,820,446	+				+0.5
4,820,446	+				-1.2
4,820,446	+				-0.9
4,820,695	+				+0.6
4,820,741	+				-0.3
4,820,911	-				-0.2
4,820,976	+				-1.3
4,820,977	-				+0.3
4,821,118	-				+0.4
4,821,226	+				-0.6
4,821,227	-				+1.1
4,821,230	-				+1.0