Strain Fitness in Pseudomonas simiae WCS417 around PS417_21815

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,735,776	-		PS417_21805	0.68	+1.5
4,735,776	-		PS417_21805	0.68	+1.6
4,735,776	-		PS417_21805	0.68	+0.6
4,735,776	-		PS417_21805	0.68	+0.1
4,735,833	-		PS417_21805	0.74	-0.8
4,735,848	-		PS417_21805	0.76	-0.1
4,735,875	-		PS417_21805	0.79	-0.2
4,735,937	+		PS417_21805	0.85	-0.4
4,735,938	-		PS417_21805	0.85	-1.6
4,736,076	-				-0.5
4,736,136	-				+0.2
4,736,535	-				-1.1
4,736,535	-				-0.3
4,736,854	+				+0.3
4,736,855	-				+1.8
4,736,855	-				+0.7
4,736,855	-				+1.1
4,736,883	+				+0.1
4,736,884	-				-0.0
4,736,884	-				-0.5
4,736,935	+		PS417_21815	0.12	+1.2
4,736,936	-		PS417_21815	0.12	+0.0
4,737,181	+		PS417_21815	0.28	+0.5
4,737,181	+		PS417_21815	0.28	+0.4
4,737,185	+		PS417_21815	0.28	-0.1
4,737,185	+		PS417_21815	0.28	-0.3
4,737,185	+		PS417_21815	0.28	-0.2
4,737,216	+		PS417_21815	0.30	+0.9
4,737,217	-		PS417_21815	0.30	+1.5
4,737,226	+		PS417_21815	0.31	-2.4
4,737,402	+		PS417_21815	0.43	-2.9
4,737,402	+		PS417_21815	0.43	-0.2
4,737,412	+		PS417_21815	0.43	+1.3
4,737,412	+		PS417_21815	0.43	-0.1
4,737,419	+		PS417_21815	0.44	-0.9
4,737,596	+		PS417_21815	0.56	+0.8
4,737,597	-		PS417_21815	0.56	-2.5
4,737,597	-		PS417_21815	0.56	-1.2
4,737,597	-		PS417_21815	0.56	-0.5
4,738,153	+				-2.1
4,738,215	+				-0.6
4,738,215	+				+0.2
4,738,262	+				+0.8
4,738,262	+				-0.4
4,738,262	+				-0.0
4,738,263	-				-1.7
4,738,263	-				-0.0
4,738,263	-				-1.9
4,738,438	+		PS417_21820	0.14	-2.3
4,738,870	+				+0.2
4,738,871	-				-2.0
4,738,995	+				+0.5
4,738,995	+				+1.1
4,738,996	-				+0.1
4,739,083	+				-0.1
4,739,083	+				+0.1
4,739,083	+				-0.4
4,739,084	-				-2.2
4,739,086	-				+0.0
4,739,112	+				+0.8
4,739,112	+				-0.4
4,739,112	+				-1.3
4,739,112	+				-2.0
4,739,121	+				-1.5
4,739,126	-				+0.2