Strain Fitness in Pseudomonas simiae WCS417 around PS417_21260

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,621,371	+				-0.3
4,621,371	+				-0.7
4,621,372	-				-2.0
4,621,372	-				-0.3
4,621,452	+				-0.9
4,621,453	-				-1.6
4,621,463	+				-0.3
4,621,463	+				+3.0
4,621,463	+				+0.2
4,621,463	+				-0.0
4,621,464	-				-0.0
4,621,561	+		PS417_21250	0.29	+0.3
4,621,561	+		PS417_21250	0.29	-1.0
4,621,561	+				-0.3
4,621,571	+		PS417_21250	0.32	+0.0
4,621,571	+		PS417_21250	0.32	-1.6
4,621,571	+		PS417_21250	0.32	+2.2
4,621,572	-		PS417_21250	0.32	-0.3
4,621,590	+		PS417_21250	0.37	-0.1
4,621,590	+		PS417_21250	0.37	+2.7
4,621,604	+		PS417_21250	0.42	+1.3
4,621,706	+		PS417_21250	0.71	+0.3
4,621,830	-				+1.1
4,621,861	+				-0.1
4,621,877	-				-0.3
4,621,885	-				+0.6
4,621,911	+				-1.1
4,621,911	+				-1.3
4,621,912	-				-0.3
4,621,912	-				+1.4
4,622,079	+		PS417_21255	0.26	+0.9
4,622,079	+		PS417_21255	0.26	+1.0
4,622,080	-		PS417_21255	0.27	-0.1
4,622,279	+				+2.7
4,622,280	-				+0.2
4,622,280	-				-2.5
4,622,280	-				+0.6
4,622,288	-				-0.0
4,622,288	-				-0.7
4,622,293	+				+0.7
4,622,294	-				-1.1
4,622,333	+				-1.8
4,622,333	+				+1.2
4,622,334	-				-0.7
4,622,334	-				-0.0
4,622,334	-				-1.2
4,622,334	-				+2.0
4,622,334	-				+0.1
4,622,334	-				+1.2
4,622,397	+				-1.1
4,622,398	-				-0.3
4,622,470	-				+0.7
4,622,537	+				-0.4
4,622,537	+		PS417_21260	0.30	+0.2
4,622,537	+		PS417_21260	0.30	+1.5
4,622,538	-		PS417_21260	0.30	+0.2
4,622,538	-		PS417_21260	0.30	+0.4
4,622,538	-		PS417_21260	0.30	+0.4
4,622,538	-		PS417_21260	0.30	+0.5
4,622,541	+		PS417_21260	0.30	-0.4
4,622,541	+		PS417_21260	0.30	-0.6
4,622,541	+		PS417_21260	0.30	-0.6
4,622,541	+		PS417_21260	0.30	-0.1
4,622,562	+		PS417_21260	0.34	+3.6
4,622,563	-		PS417_21260	0.34	+0.4
4,622,584	+		PS417_21260	0.37	+0.1
4,622,631	+		PS417_21260	0.45	+0.5
4,622,632	-		PS417_21260	0.45	+1.1
4,622,632	-		PS417_21260	0.45	+0.5
4,622,676	+		PS417_21260	0.53	-1.4
4,622,676	+		PS417_21260	0.53	+0.8
4,622,676	+				+0.4
4,622,677	-				-0.3
4,622,677	-		PS417_21260	0.53	-1.6
4,622,677	-		PS417_21260	0.53	-0.3
4,622,677	-		PS417_21260	0.53	+1.1
4,622,804	+		PS417_21260	0.74	-0.1
4,622,823	+		PS417_21260	0.77	-0.2
4,622,823	+		PS417_21260	0.77	+1.3
4,622,824	-		PS417_21260	0.77	+0.1
4,622,924	-				+1.0
4,622,924	-				-1.3
4,622,969	-				-1.6
4,622,969	-				+0.7
4,622,976	-				+0.5
4,622,992	+				+0.2
4,622,995	+				+0.1
4,623,101	-		PS417_21265	0.38	-2.6
4,623,305	-				+0.1
4,623,311	+				+0.5
4,623,543	+		PS417_21270	0.25	-0.2
4,623,543	+		PS417_21270	0.25	-1.5
4,623,866	-				-0.7
4,623,913	+				-0.8
4,623,913	+				+1.7
4,623,914	-				-0.6
4,623,914	-				+0.2
4,623,937	+				+0.4
4,623,937	+				-0.1
4,623,937	+				-2.8
4,623,937	+				-1.0
4,623,937	+				+0.1
4,623,938	-				+1.4
4,623,938	-				-0.3