Strain Fitness in Pseudomonas simiae WCS417 around PS417_20355

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,416,770	+				+0.2
4,416,770	+				-1.5
4,416,933	+				-0.6
4,416,933	+				+0.1
4,416,934	-				+0.5
4,416,934	-				-1.7
4,416,947	+				-1.5
4,416,947	+				-0.3
4,417,057	-		PS417_20350	0.18	-0.0
4,417,057	-		PS417_20350	0.18	-0.6
4,417,079	+				-1.1
4,417,200	+		PS417_20350	0.47	+0.3
4,417,201	-		PS417_20350	0.47	+0.9
4,417,266	+				+0.1
4,417,266	+		PS417_20350	0.60	+0.0
4,417,266	+		PS417_20350	0.60	+0.9
4,417,269	+		PS417_20350	0.61	+0.9
4,417,269	+		PS417_20350	0.61	+0.9
4,417,291	+		PS417_20350	0.65	+0.1
4,417,318	-		PS417_20350	0.71	-0.2
4,417,318	-		PS417_20350	0.71	-0.2
4,417,397	+		PS417_20350	0.87	-0.3
4,417,398	-		PS417_20350	0.87	-0.1
4,417,473	+				-0.7
4,417,474	-				+0.1
4,417,474	-				-0.9
4,417,484	-				-0.8
4,417,506	+				-0.3
4,417,527	+				-0.2
4,417,527	+				+0.7
4,417,549	+				-2.3
4,417,550	-				-0.3
4,417,585	+				+0.7
4,417,585	+				+0.4
4,417,616	+				+0.3
4,417,617	-				-0.6
4,417,617	-				-0.3
4,417,617	-				+0.4
4,417,617	-				-0.5
4,417,627	-				-0.3
4,417,650	+				-1.4
4,417,673	+				+1.1
4,417,673	+				+0.1
4,417,674	-				+1.1
4,417,674	-				-0.2
4,417,677	+				+0.8
4,417,677	+				-0.5
4,417,678	-				-0.2
4,417,678	-				-1.1
4,417,680	+				+0.4
4,417,680	+				+0.2
4,417,681	-		PS417_20355	0.10	+0.4
4,417,699	+		PS417_20355	0.16	+0.9
4,417,700	-		PS417_20355	0.16	+0.3
4,417,700	-		PS417_20355	0.16	-0.1
4,417,735	-		PS417_20355	0.27	+0.8
4,417,887	-				+0.9
4,417,957	+				-0.2
4,417,958	-				+1.0
4,417,982	+				+1.0
4,417,983	-				-0.2
4,418,083	+		PS417_20360	0.16	-1.3
4,418,083	+		PS417_20360	0.16	+0.0
4,418,083	+		PS417_20360	0.16	-0.0
4,418,129	+		PS417_20360	0.23	+0.5
4,418,129	+				+3.0
4,418,269	-		PS417_20360	0.42	-1.1
4,418,298	-		PS417_20360	0.46	-0.4
4,418,311	-		PS417_20360	0.48	+0.7
4,418,318	+		PS417_20360	0.48	+0.7
4,418,319	-		PS417_20360	0.49	+0.8
4,418,319	-		PS417_20360	0.49	-0.1
4,418,514	-		PS417_20360	0.75	-0.4
4,418,537	+		PS417_20360	0.78	-1.5
4,418,537	+		PS417_20360	0.78	+0.7
4,418,537	+		PS417_20360	0.78	+0.2
4,418,538	-		PS417_20360	0.79	+1.4
4,418,538	-		PS417_20360	0.79	-0.9
4,418,538	-		PS417_20360	0.79	+0.2
4,418,679	-				+0.1
4,418,679	-				+0.4
4,418,758	-				+0.6
4,418,899	+				+0.2
4,418,930	+				-0.9
4,418,930	+				+1.7
4,418,930	+				+0.4
4,418,930	+				-0.4
4,418,931	-				-0.7
4,418,931	-				-1.0