Strain Fitness in Pseudomonas simiae WCS417 around PS417_18460

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,013,383	-		PS417_18450	0.45	+2.0
4,013,440	-		PS417_18450	0.52	-0.6
4,013,518	-		PS417_18450	0.62	-1.7
4,013,518	-		PS417_18450	0.62	-0.4
4,013,559	+				+0.1
4,013,559	+		PS417_18450	0.68	-0.5
4,013,559	+		PS417_18450	0.68	-0.8
4,013,560	-		PS417_18450	0.68	-0.0
4,013,805	+				-0.8
4,013,806	-				-0.7
4,013,817	+				-2.5
4,013,817	+				+0.0
4,013,931	-				+0.2
4,014,054	+		PS417_18455	0.55	+2.1
4,014,055	-		PS417_18455	0.55	+0.0
4,014,090	+		PS417_18455	0.70	+1.7
4,014,220	+				-0.2
4,014,249	+				-0.8
4,014,279	+		PS417_18460	0.11	-0.0
4,014,465	-		PS417_18460	0.38	-0.8
4,014,660	-		PS417_18460	0.67	+0.0
4,014,894	-				+0.5
4,015,022	+		PS417_18465	0.10	+0.8
4,015,374	-		PS417_18465	0.36	+0.4
4,015,389	-		PS417_18465	0.37	-0.7
4,015,389	-				+1.2
4,015,389	-		PS417_18465	0.37	-0.6
4,015,716	-		PS417_18465	0.60	-1.2