Strain Fitness in Pseudomonas simiae WCS417 around PS417_18185

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,960,633	-		PS417_18180	0.47	-1.1
3,960,633	-		PS417_18180	0.47	+0.6
3,960,876	-		PS417_18180	0.64	+0.5
3,960,876	-		PS417_18180	0.64	-0.0
3,960,975	+		PS417_18180	0.71	+0.7
3,960,976	-		PS417_18180	0.71	-0.2
3,960,976	-		PS417_18180	0.71	-0.3
3,961,032	-		PS417_18180	0.75	+0.4
3,961,046	+		PS417_18180	0.76	+0.0
3,961,046	+		PS417_18180	0.76	+0.1
3,961,088	+		PS417_18180	0.78	-0.3
3,961,088	+		PS417_18180	0.78	+0.1
3,961,089	-				+0.1
3,961,251	-		PS417_18180	0.90	-1.9
3,961,255	-				-0.9
3,961,583	+				+0.1
3,961,669	+				-0.3
3,961,670	-				-0.3
3,961,876	+				-1.7
3,961,877	-		PS417_18185	0.29	-0.2
3,962,074	+		PS417_18185	0.52	-0.6
3,962,074	+		PS417_18185	0.52	-0.7
3,962,074	+		PS417_18185	0.52	-0.8
3,962,075	-		PS417_18185	0.52	+0.8
3,962,095	+		PS417_18185	0.55	-1.4
3,962,492	+				+0.6
3,962,629	+		PS417_18190	0.18	-0.9
3,962,653	+		PS417_18190	0.21	+0.0
3,962,822	+		PS417_18190	0.41	+1.9
3,962,823	-		PS417_18190	0.41	-1.1
3,962,823	-		PS417_18190	0.41	+0.6
3,962,858	+		PS417_18190	0.46	+0.3
3,962,859	-		PS417_18190	0.46	-0.2
3,963,082	+		PS417_18190	0.73	+1.5
3,963,083	-		PS417_18190	0.73	-0.3
3,963,320	+				+1.3