Strain Fitness in Pseudomonas simiae WCS417 around PS417_17200

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,755,570	+		PS417_17195	0.63	+0.8
3,755,573	+		PS417_17195	0.63	+1.2
3,755,573	+		PS417_17195	0.63	+0.8
3,755,653	+		PS417_17195	0.66	+1.0
3,755,654	-		PS417_17195	0.66	-0.8
3,755,654	-		PS417_17195	0.66	+1.1
3,755,660	+		PS417_17195	0.66	+0.2
3,755,660	+		PS417_17195	0.66	+0.8
3,755,661	-		PS417_17195	0.66	-0.3
3,755,693	+		PS417_17195	0.67	-1.2
3,755,693	+				-1.1
3,755,694	-		PS417_17195	0.67	-0.3
3,755,694	-		PS417_17195	0.67	+0.3
3,755,694	-		PS417_17195	0.67	+1.2
3,755,695	+		PS417_17195	0.67	-0.6
3,755,696	-		PS417_17195	0.67	-0.4
3,755,696	-		PS417_17195	0.67	-0.8
3,755,846	-		PS417_17195	0.73	-0.1
3,755,898	-		PS417_17195	0.75	-0.6
3,755,939	+		PS417_17195	0.76	+1.3
3,755,940	-		PS417_17195	0.76	-1.4
3,755,940	-		PS417_17195	0.76	-1.7
3,755,940	-		PS417_17195	0.76	-0.4
3,755,961	-		PS417_17195	0.77	-0.6
3,755,961	-		PS417_17195	0.77	+0.5
3,755,961	-		PS417_17195	0.77	+0.3
3,755,961	-		PS417_17195	0.77	-0.2
3,755,963	+		PS417_17195	0.77	-0.3
3,755,966	+		PS417_17195	0.77	+0.6
3,755,966	+		PS417_17195	0.77	+0.7
3,755,967	-		PS417_17195	0.77	-0.2
3,755,967	-		PS417_17195	0.77	-1.6
3,755,967	-		PS417_17195	0.77	+0.8
3,755,967	-		PS417_17195	0.77	+0.4
3,756,044	+		PS417_17195	0.80	+2.3
3,756,044	+		PS417_17195	0.80	+0.7
3,756,158	-		PS417_17195	0.85	+0.9
3,756,206	-		PS417_17195	0.86	-1.4
3,756,257	+		PS417_17195	0.88	+0.1
3,756,563	+				+1.6
3,756,564	-				+1.8
3,756,569	-				+1.7
3,756,794	+		PS417_17200	0.29	+1.0
3,756,795	-				+3.3
3,756,795	-		PS417_17200	0.29	+2.1
3,756,889	-		PS417_17200	0.42	-0.9
3,757,053	+		PS417_17200	0.63	+3.8
3,757,053	+		PS417_17200	0.63	+1.9
3,757,053	+				+0.8
3,757,053	+		PS417_17200	0.63	+2.7
3,757,148	-		PS417_17200	0.75	-0.4
3,757,223	+		PS417_17200	0.85	+1.7
3,757,252	+		PS417_17200	0.89	+1.5
3,757,253	-		PS417_17200	0.89	+1.4
3,757,431	+				-0.4
3,757,468	+				+0.9
3,757,468	+				+0.9
3,757,468	+				+1.2
3,757,469	-				-1.6
3,757,469	-				-1.8
3,757,552	-		PS417_17205	0.14	-0.2
3,757,552	-		PS417_17205	0.14	-1.7
3,757,603	+		PS417_17205	0.19	+0.1
3,757,604	-		PS417_17205	0.19	-1.6
3,757,604	-		PS417_17205	0.19	-1.7
3,757,604	-		PS417_17205	0.19	-5.1
3,757,605	+		PS417_17205	0.19	+1.0
3,757,605	+		PS417_17205	0.19	+0.8
3,757,605	+		PS417_17205	0.19	+1.3
3,757,605	+		PS417_17205	0.19	+1.2
3,757,606	-		PS417_17205	0.20	-2.8
3,757,606	-		PS417_17205	0.20	-3.0
3,757,834	+		PS417_17205	0.45	+0.3