Strain Fitness in Pseudomonas simiae WCS417 around PS417_16850

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,675,364	+		PS417_16840	0.88	-0.3
3,675,440	-				+3.8
3,675,481	+				-1.5
3,675,481	+				+0.8
3,675,695	-		PS417_16845	0.29	-0.8
3,675,766	+		PS417_16845	0.43	+0.2
3,675,767	-		PS417_16845	0.43	-0.8
3,675,914	+				+0.4
3,676,011	+				-1.0
3,676,011	+				-0.2
3,676,011	+				-0.8
3,676,012	-				-2.6
3,676,012	-				-0.4
3,676,163	+		PS417_16850	0.44	+0.1
3,676,164	-		PS417_16850	0.44	+2.1
3,676,226	+		PS417_16850	0.67	-0.7
3,676,358	+		PS417_16855	0.13	-0.7
3,676,577	+		PS417_16855	0.77	+0.2
3,676,723	+				+0.3
3,676,724	-				+2.1
3,676,778	+				+0.4
3,676,842	-				-1.3
3,676,857	+		PS417_16860	0.17	-0.0
3,676,857	+		PS417_16860	0.17	-1.6
3,676,860	-		PS417_16860	0.17	-1.0
3,676,860	-		PS417_16860	0.17	-0.8
3,676,915	-		PS417_16860	0.29	-0.4
3,677,094	-		PS417_16860	0.68	-1.5
3,677,167	-		PS417_16860	0.84	-0.7
3,677,212	-				+0.9
3,677,274	-				+0.7
3,677,274	-				-0.8
3,677,274	-				-0.8
3,677,301	+				-0.5