Strain Fitness in Pseudomonas simiae WCS417 around PS417_15840

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,468,130	+		PS417_15835	0.28	-0.1
3,468,131	-		PS417_15835	0.28	-1.1
3,468,178	+		PS417_15835	0.34	-0.8
3,468,178	+		PS417_15835	0.34	-0.2
3,468,179	-		PS417_15835	0.34	-0.4
3,468,196	+		PS417_15835	0.36	+0.5
3,468,196	+		PS417_15835	0.36	+0.5
3,468,197	-		PS417_15835	0.36	+0.2
3,468,355	-		PS417_15835	0.53	+0.2
3,468,355	-		PS417_15835	0.53	-2.5
3,468,355	-		PS417_15835	0.53	+0.4
3,468,355	-		PS417_15835	0.53	-0.8
3,468,496	+		PS417_15835	0.68	-1.2
3,468,595	+		PS417_15835	0.79	-1.2
3,468,595	+		PS417_15835	0.79	-1.1
3,468,633	+				+1.1
3,468,634	-		PS417_15835	0.83	-0.2
3,468,634	-		PS417_15835	0.83	-0.1
3,468,763	-				-0.2
3,468,765	+				-0.5
3,468,818	+				-0.9
3,468,819	-				-0.5
3,468,859	-				-0.5
3,468,869	+				-0.6
3,468,869	+				-1.2
3,468,870	-				-1.9
3,468,912	-				-0.8
3,468,943	+				-1.9
3,468,943	+				+0.0
3,468,943	+				-0.7
3,468,980	+				+0.8
3,468,981	-				+1.4
3,469,172	-		PS417_15840	0.19	-0.8
3,469,179	-		PS417_15840	0.20	-1.6
3,469,202	-		PS417_15840	0.23	-1.3
3,469,202	-		PS417_15840	0.23	-0.0
3,469,745	-		PS417_15840	0.79	-1.4
3,469,745	-		PS417_15840	0.79	-0.6
3,469,747	-		PS417_15840	0.79	+1.5
3,469,823	+		PS417_15840	0.87	+0.1
3,469,823	+		PS417_15840	0.87	-1.2
3,469,824	-		PS417_15840	0.87	-1.9
3,469,875	+				+0.4
3,469,944	-				+0.0
3,469,949	-				-2.2
3,469,949	-				-0.2
3,469,949	-				-0.7
3,469,949	-				-0.3
3,469,949	-				+1.0
3,470,299	+		PS417_15845	0.33	-0.4
3,470,299	+		PS417_15845	0.33	-0.9
3,470,299	+		PS417_15845	0.33	-2.2
3,470,299	+		PS417_15845	0.33	-0.8
3,470,300	-		PS417_15845	0.33	-0.6
3,470,300	-		PS417_15845	0.33	-0.5
3,470,301	+				-1.7
3,470,302	-		PS417_15845	0.33	-1.6
3,470,302	-		PS417_15845	0.33	+0.4
3,470,309	+		PS417_15845	0.34	-0.8
3,470,340	+		PS417_15845	0.37	+0.2
3,470,552	+		PS417_15845	0.54	-0.9
3,470,636	-		PS417_15845	0.60	-1.4
3,470,648	-		PS417_15845	0.61	-0.1
3,470,792	+		PS417_15845	0.73	-0.1
3,470,899	+		PS417_15845	0.82	-0.2